Methanocella conradii: Mtc_0254
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Entry
Mtc_0254 CDS
T01774
Name
(GenBank) Superfamily II helicase, archaea-specific
KO
K03725
putative ATP-dependent RNA helicase [EC:5.6.2.-]
Organism
mez
Methanocella conradii
Brite
KEGG Orthology (KO) [BR:
mez00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mez03019
]
Mtc_0254
Messenger RNA biogenesis [BR:
mez03019
]
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Others
Mtc_0254
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5814
DEAD
Helicase_C
ResIII
DEXQc_Suv3
Motif
Other DBs
NCBI-ProteinID:
AFC99025
UniProt:
H8I922
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Position
253043..255505
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AA seq
820 aa
AA seq
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MPLYIVATPYRKDDFKVYPIRDEGAPLFVGVLSLQRTDKGVRPLRVRVVREKEDEYLPVS
SFIDLLKAASAIMTSGMEPAQESVFNEMLAAYQLSSRRVSLCRFCLMEDRVTFKRPDMVR
YKGELICLECAKKELKREVSYKGRITREGLERLESLLVKTRDLGRIIAMLTPSNLPPELT
RYDTIPASDERVKAVKIEGLDLDPRLKAILMERMEELMPVQAKSVHSGLLKGESQLVVSA
TATGKTLIGEMAGVNNYLRGRGRMLFLVPLVALANQKYEQFKSRYGALGKVGIRVGTSRI
ALNDLKMNVSLGSDIIVGTYEALDFVLRKGEALRGVGTVVIDEVHMLEDEERGHRLDGLI
ARLRSCAPQAQFIFLSATIGNPKEISRRLKARLVEYEHRPVPLERHLIFAGAHEKNRLIE
EYASKEYARVSSKGFRGQTIVFTNSRKKCHQISQSLRIQSAPYHAGLTYAQRKGVEERFA
RGELKVVVTTAALAAGVDFPASQVIFESLAMGREWLSVSEFQQMQGRAGRPDYHDSGKII
VLADPEFEMDGEAEDAVAFRLLGGCAEHVNVAYDESGQMEEALANACIASSEAELKRMGD
AMLGMTCDTGYLIDRCVEKGLMVREGGRVKNTPLGRAIATHFLRVENAYLIRDRLYKKAD
PLDIAVELEPFDAAYFRNAERLSRILGVSVPSRAFSPASLDIVFSGESIAKLDRSMQAQL
TDFAREFLDCECDDAPFCGCPERKFSKKIVEYRLQGKDPKGISRAIAADYSLSAYDGDIL
GYLDRLTRNLDAIGEIAGILGRHEAAREARELAKRIEDAA
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgccattatacatagtcgccaccccgtacaggaaggacgattttaaggtatatcccatc
agggatgagggcgctcccctcttcgttggagtgctatccttacagaggaccgataagggc
gtgaggcctttaagggtccgcgtggtcagggaaaaggaggacgagtacctgccggtatcc
tcttttatcgacctgctaaaggccgcctccgccataatgacctccggtatggagccagcg
caggagtccgtttttaacgagatgctcgccgcctaccagctctcctcaaggagggttagc
ctgtgccgcttctgcctcatggaggaccgggtgaccttcaagcgccctgacatggtgcga
tacaagggggagctaatctgcctcgagtgcgctaagaaggagctaaaacgcgaggtatcg
tataagggccgcatcactagggaggggcttgagaggctggagtctctactcgttaagacg
agggaccttggccgcatcatcgcgatgctcacgccgtcgaacctgccgcccgagctcacc
aggtacgacaccatccccgcctccgacgagagggtgaaagcggttaaaatcgagggcctc
gaccttgacccccgcctgaaggccatcttgatggaaaggatggaggagctcatgcctgtc
caggcgaagtcggtccactccgggctattaaagggggagagccagctcgtcgtctcggcc
accgccacggggaagacgcttatcggcgagatggccggggtgaacaactacctcaggggg
aggggcaggatgctgttcctcgtcccactcgtggcgctggccaaccagaagtacgagcag
tttaaaagcagatacggggctctgggaaaggtggggatccgtgtgggcacctcccggatc
gccttgaatgacctgaagatgaacgtcagcctcggctccgacataatagttggcacctat
gaggcgctcgacttcgtgctaaggaagggcgaggctttgaggggggtaggcaccgtggtg
atcgacgaggtgcacatgctcgaggacgaggagaggggccaccgtctggatggattgata
gccaggctgaggtcatgcgccccgcaggcacagttcatattcctctccgctacaatagga
aacccaaaggagatatccaggcgcctaaaagcccggctcgtggagtacgagcacaggccc
gtcccccttgagaggcacctcatattcgccggggcgcacgagaagaacaggctcatcgag
gagtacgcctcaaaggagtatgcaagggtatcctcaaagggtttcaggggccagaccata
gtgttcactaactcaaggaagaagtgccaccagataagccagtccctccgcatccagtct
gccccgtaccatgccggcttaacctatgcccagaggaagggcgttgaggagaggtttgcc
aggggggagcttaaagtcgtggtcaccacggcggcgcttgccgcgggcgtggacttcccc
gcctctcaggtcatctttgagtcgctggccatgggcagggagtggctatctgtaagcgag
ttccagcagatgcaggggagggcggggaggcccgactaccatgactcggggaaaattata
gtcctggccgacccggagtttgagatggatggggaggcggaggacgcggtggcgttcagg
ctgctcggtggatgcgctgagcatgtgaacgtggcctatgacgagtccgggcagatggag
gaagccctggccaacgcctgtatcgcctcgagcgaggctgagctaaagaggatgggcgac
gcaatgctcggcatgacgtgcgacactgggtaccttattgacaggtgcgttgaaaagggc
cttatggtaagggaaggagggcgcgtgaagaacacccccctgggcagggctatcgccacc
catttcctgagggtggagaacgcttacctcataagggataggctatataaaaaagccgat
cccctcgacatcgcagtggagcttgagccgttcgacgccgcctacttcaggaacgccgag
cggctttcccgtatcctgggggtgagcgtgccttccagggcgttcagcccggccagcctg
gacatcgtgttctcaggcgagtccatcgccaagctggatagaagcatgcaggcccagctc
accgacttcgcccgggagtttttggattgcgagtgcgatgacgcccccttctgcggctgc
ccggagcgcaagttcagcaagaagatagtcgaatacaggctgcagggcaaggacccgaaa
ggcatttccagggccatcgccgcggactatagcctgagcgcctacgacggcgacatcctg
ggctacctggacaggcttaccagaaacctggacgccatcggcgagatagcgggaatcctg
ggcaggcatgaggccgcccgcgaggcccgggagctggccaaaaggatagaggacgccgca
taa
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