Methanocella conradii: Mtc_0357
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Entry
Mtc_0357 CDS
T01774
Symbol
tbpE
Name
(GenBank) TATA-box binding protein (TBP), component of TFIID and TFIIIB
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
mez
Methanocella conradii
Pathway
mez03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mez00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Mtc_0357 (tbpE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mez03000
]
Mtc_0357 (tbpE)
03021 Transcription machinery [BR:
mez03021
]
Mtc_0357 (tbpE)
Transcription factors [BR:
mez03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
Mtc_0357 (tbpE)
Transcription machinery [BR:
mez03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
Mtc_0357 (tbpE)
RNA polymerase III system
TFIIIB
Mtc_0357 (tbpE)
RNA polymerase I system
SL1/TIF-1B
Mtc_0357 (tbpE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF3378
T4bSS_IcmS
Motif
Other DBs
NCBI-ProteinID:
AFC99127
UniProt:
H8IA61
LinkDB
All DBs
Position
363077..363643
Genome browser
AA seq
188 aa
AA seq
DB search
MSKAEEAKKTITIENVVASTAIGQEIDLKSVTLALEGADYDPEQFPGLVYRTKDPKTAAL
IFRSGKIVCTGAKSIEDVDRGLKKVFKKIASVGIKVDPNPEITVQNIVASADLGSVLNLN
AIAIGLGLENIEYEPEQFPGLVYRLDSPKVVVLLFGSGKLVVTGGKKPKDAEEAVERIVK
ELEGLALL
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagccgaagaagcgaagaagaccatcacgattgagaacgtcgtggcgtccacc
gccattggccaggagatcgacctgaagtcggtcacactcgccctcgagggcgcagactat
gacccggagcagttccccggcctggtctacaggacgaaggatcccaagaccgccgccctt
atttttaggagtggcaagatcgtgtgcaccggcgcgaagagcatagaggacgtggaccgc
ggcctcaagaaggttttcaagaagatagccagcgtgggcatcaaggtggacccgaacccc
gagatcacggtgcagaacatagtggcatcggcagaccttggctcggttttaaatttaaac
gccatcgccatcggcctgggcctggaaaatatcgagtatgagcccgagcagttccctgga
ttggtctacaggctggatagcccgaaggtggtagtgctgctattcggctccggcaaatta
gtggtcacaggaggcaagaagccgaaggacgccgaggaggccgtcgagcgcatcgtcaag
gaattagaaggcctggccctattgtga
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integrated database retrieval system
