Methanocella conradii: Mtc_1408
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Entry
Mtc_1408 CDS
T01774
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
mez
Methanocella conradii
Pathway
mez00300
Lysine biosynthesis
mez00470
D-Amino acid metabolism
mez01100
Metabolic pathways
mez01110
Biosynthesis of secondary metabolites
mez01120
Microbial metabolism in diverse environments
mez01230
Biosynthesis of amino acids
Module
mez_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
mez00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Mtc_1408 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Mtc_1408 (dapF)
Enzymes [BR:
mez01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
Mtc_1408 (dapF)
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Pro_racemase
Motif
Other DBs
NCBI-ProteinID:
AFD00162
UniProt:
H8I4I3
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All DBs
Position
complement(1342580..1343416)
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AA seq
278 aa
AA seq
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MSLKFTKLQGNGNDFILIDEYEGTVVPDDKKAAFARKYCHRRFGIGGDGVIFLSKSGRAP
LRMRIFNEDGSEAEMCGNGIRCFAKYALDQRYIVPGHTRVETMAGVLELATSVSEGKTHV
KVCMGKPLFDRVKIPAQGRGEFINVPLHGYEVSAVNTGVPHAVIFVDSLEDPYLMDAAPQ
IRFDKIFPKGANVNFVQREAGGLRVRTYERGVEGETLSCGTGSVAAAAVARHLGMIRDST
IVKTAGGELLVSFENDIAYMEGDAETVFTGELEFEPER
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgaagttcaccaagctgcagggcaacggcaacgatttcattttaatagacgaa
tacgagggcacggtggtgcccgacgataagaaggccgccttcgccaggaaatattgccac
aggcgcttcggcattggcggagatggagtcatcttcttaagcaagtcgggcagggctcca
ttaaggatgcgcatcttcaacgaggacggctctgaggctgagatgtgcggcaacggcatc
cgctgctttgccaagtacgccctcgaccagcgctacatagtgcccggccacacgagggtg
gagaccatggccggcgttctcgagctggccaccagcgtgtcagagggcaagacgcacgtc
aaggtctgcatgggtaagcccctctttgaccgcgtgaaaatccctgcgcagggacgcggc
gagttcatcaacgttccgctccacggctacgaggtttcggcggttaacacgggcgtgccg
cacgccgtcattttcgtggactcgcttgaggacccttatttaatggatgcggctccccag
attaggttcgataagatattcccgaagggcgccaacgtgaacttcgtccagagggaggcg
ggggggttgagggtgaggacatatgagcggggcgtggagggcgagacgcttagctgtggc
accggctcggtggcggccgcagcggtggcaaggcacctgggcatgatccgtgactcaacc
atcgttaagactgcgggcggggagctcctggtcagcttcgagaacgatatcgcgtatatg
gaaggagacgccgaaacagtctttaccggcgagcttgaattcgagcccgaacgttaa
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