Methanocella conradii: Mtc_1489
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Entry
Mtc_1489 CDS
T01774
Symbol
truD
Name
(GenBank) putative tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
mez
Methanocella conradii
Brite
KEGG Orthology (KO) [BR:
mez00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mez03016
]
Mtc_1489 (truD)
Enzymes [BR:
mez01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
Mtc_1489 (truD)
Transfer RNA biogenesis [BR:
mez03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Mtc_1489 (truD)
Prokaryotic type
Mtc_1489 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AFD00241
UniProt:
H8I607
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All DBs
Position
1415910..1417250
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AA seq
446 aa
AA seq
DB search
MPGLQDLRRQVSMARKTPFELEMLMGIEAYMTDEEGIGGDLRIEPADFKVSEISDFKVGQ
SGEYLIVRLTKENWETHHLIRDLSRQLGISEERIGIAGTKDKRAVTSQLISIRGISEEQL
ARVDLPRVRLEPIGRANRDIGLGDLRGNEFDINIKNIVLDKEGLSMRVKAIDESIARAGG
VPNFFGYQRFGIVRPVTHLVGKKLVQGDVEGAAMAYIAASFPGEMEENRKARDLVFKTKD
FKEGLKLYPLNLRYERAMMHYLVEHPGDYAGAFRALSPRLLKLFVHAYQSYLFNRLLSRR
MLDGISLVEPVEGDVICFADGRGVADVSKLEVVTGRNLADVRFLIKRHRAFVTLPLIGKD
TALDGGITGEEERRILEEEGITPADFAIAAMPDLASSGSRREAMLGVKPNIAVYDGVANV
KFFLPKGSYATTVLREYMKSSPEHMD
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgcccggcctgcaggatttaaggcggcaggtatccatggccaggaaaacgccgtttgag
ctggaaatgctcatgggaattgaggcgtacatgactgacgaggagggcatagggggggac
ctccggatcgagcctgcggacttcaaagtgagcgagatatctgattttaaggtgggacag
tcgggtgaatatctaatagttcggctcacgaaggagaactgggagacccaccacctcatc
cgtgacctgtcgaggcagctaggcataagcgaggagcgtattggcatagctggcacgaag
gacaagcgggcggtcacctcccagttgataagcataagaggcatttcagaagagcagctg
gcacgggtggacctgccccgcgtcaggctggagcctattgggcgggcgaatagggatata
gggctgggggacctgcgtggcaacgagttcgacatcaacattaagaatatcgtgcttgat
aaagaggggctttccatgcgcgtgaaggctatagacgagagcattgcgagagcggggggc
gtcccgaacttttttgggtaccagcgtttcggcatcgtgcggcctgtcacccaccttgta
ggcaaaaagctggtacagggcgacgtcgaaggcgccgccatggcctacatagcagcctca
ttcccgggcgagatggaggagaacaggaaggccagggacttagtcttcaagacgaaggac
tttaaggagggactcaagctctatcctttaaatttaaggtatgagcgtgccatgatgcat
tacctggtggagcatcctggcgactatgcaggggctttccgtgcattatccccccggctt
ttaaagctattcgtgcacgcttatcaatcgtatctcttcaacaggctccttagccggcgc
atgcttgacggcatttccctggtagagccggtcgagggggatgtgatatgcttcgctgac
gggcgaggagtggccgacgtgtcgaagctggaggtcgtgaccgggagaaacctcgctgat
gtcaggtttttaataaagaggcatcgagccttcgtgaccctgcccctgataggcaaggat
acggcgctcgatggcggcatcaccggcgaagaagagaggaggatacttgaagaggaggga
attacgcctgccgattttgccatcgccgccatgcccgaccttgcgtcatcgggctccagg
cgggaagcaatgctaggcgtgaagccaaatatagcggtgtacgatggggtggcgaacgtt
aagtttttcctgccaaaaggctcctatgccacgaccgtgctcagggagtacatgaaatca
agccctgaacacatggattag
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