Methanocella conradii: Mtc_1683
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Entry
Mtc_1683 CDS
T01774
Name
(GenBank) PKD repeat-containing protein
Organism
mez
Methanocella conradii
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3344
PKD_4
PKD
CARDB
Motif
Other DBs
NCBI-ProteinID:
AFD00429
UniProt:
H8I8V8
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All DBs
Position
complement(1599712..1605204)
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AA seq
1830 aa
AA seq
DB search
MSINSISTNPISNDKDGKNHLSLKIFMDSLRIKHGIRGAGIFIALIVMIAVLPAIVTADN
YVGGLPLTTVQTGTVSGDVWCDINPAPNWGDKNVTKTFTLPAAAVAEPGRIQWARLYISA
YCGHMQNDYAFTITNKWDGNGDGVYEQTWTETGHAPFHFVVAQGDGISGNDNTAFGGGAN
DPYKIINDHETRVTSDYLMYYDVTNMIQGQTINVNVNTEGSYDGRIKVISLVVAYNDGDS
DQIQYWINQGHDVCSYYCEDHYDEVAVGTTTFNTQGIGPISSATLAIDYMASNSGFYGFP
TSDNNFVASTKTGNFTNQELDRTPDVQGAYSGVKTWDVTSLINGSSDVTFAYSRYLPATG
IAGFFKLPLAILKVQHLTAATSPVAQFTSNVTSGVTPLTVQFTDQSTGSITGWAWDFDND
GMVDSTEQNPVYTYNAPGTYTVNLTVTGPGGSDSEIKTDYITVSLAAPVADFTANVTSGN
SPLIVSFTDRSTGNITSWAWDFDNDGMVDSTEQNPVYNFSVGGYYTVNLTVTGPGGSNST
IKANYITAKCNLKVYTLPMLDGSSVFAKETNRIRIGVQNLVGYSPTTEILINASDGWSGR
ITVPEMATMSGSKYILLNITDPTIRPLQGGTVTYTAVIDPDNLVPETLETDNTKTVTRNV
LYNGYKGAHYWEGKENVTTHRTYDLKGGLVYSFGNSSYRSGSFGVGGWTNYTVGWTPENL
TIPAGATVREVRLYVPYTWDDSFVAPDNVTVDFNGVRVPYEHWEHDQSNFGAYSNFVYGL
ITYNVTDLYRKNDFNEVVFTRNSSSTAKISMYGFMLAVVYEDQNASRKQIFLNEGFDLLG
ASQNDYGTTEEEATAYIPFTGMDIDVANATRAILITTCPSGAPQNTGDPGEGNLIVNGQQ
IGHLVWSYGQETTGESDSSQVAVDVRDIKEYLNATGGPNLVGMQSTAGASPCMCAAQAFL
VVEYPYEAPAANFTSDITGGMAPLTVQFTDRSTGNITSWAWDFNNDGIVDSIEQNPVHTY
NAPGTYTVNLTITGPGGSDSEIKTDYITVSQPSMPDLVITAVSPNKGAGDCLFANESNLI
NVTVKNQGNASSAAFTVSLDIDRMIYNASVNSLEAGASINITFSDTTIRVAGSNVTVTAT
ADSTDAVTESNETNNSLISALTVYNNGYKGKRYTGGSDISTQATFEGRIDVKYSSGNAAY
NSANWTAKVYNWSSSDIQIPPGATVLSARLYQGYTWNKMTTDPAFTMSFNGNVVTPIATY
KDRKGYGTSDYPQGVYVYDVTGLFNASGNSITITPEAGNNYGIYGAYLVVVYEDNNATWK
KVWINDECDILASKSTYSVTSDEATAYATFAGVNNSDVKSARAIAILSSAADTGKSKFFF
NGNEYTGFWQDYMTSPQIGFSAYDVKDALASGDNTARLQSYDTGNGGDSMYAQNVILVVE
HAEEAPVADFTANVTSGTAPLTVQFTDLSRNATSWAWDFDNDGIVDSTEQNPVHTYASAG
TYTVNLTVAGPGGSDSEAKADYITVSPSIVTISIVPSSENAPVDGTRAIDIVALSLPLGL
SGYALNVSLDNASVGEVVNVSYPAWAALNSTTTLPGDNVRISGVDLNKLVEPGASNVTLA
TITLRGDAPGMTGVMIDGVHMDDDAGSAILGATNNGSFTVYTYVVANFTANATSGTAGPL
SPFMVSFTDLTTGAPGPTSWQWNFGDGNTTTEQNPTHAYTTSGNYTVSLTAANQYAEDTK
TIVDYIKVRPYVEAFPGHSNAPLDPDDDFLFEDVNGNGKLDFDDVVVLFQNVEWVENNAR
VGVGPYDYNHNDRIDFDDIVQLYWEILEVI
NT seq
5493 nt
NT seq
+upstream
nt +downstream
nt
atgtctatcaattctatatcgaccaatccaatcagtaatgataaagatggaaagaatcac
ctatctcttaaaatctttatggatagcttgagaattaagcatggtattagaggagcgggc
atttttatagccctcattgtaatgatcgccgtattacctgccatcgttacggcagataac
tatgtgggcggcctgccgcttaccacggtgcagacggggactgtgtctggagacgtatgg
tgtgatattaatccagcgccaaactggggagacaaaaacgtgaccaaaacgttcacgtta
cccgccgcagcggtagccgagccgggaaggatacaatgggcccgtttgtatatatctgcg
tactgcggacacatgcaaaatgactatgcattcacaatcactaacaagtgggatgggaat
ggtgatggggtatacgaacagacctggacggagaccggacacgcaccattccactttgtg
gtagctcaaggcgatggaatctcgggaaacgataacacggcgtttggtgggggcgctaac
gacccctataaaataatcaacgaccacgagacgagggtcacaagcgactacctcatgtac
tatgatgtaacaaacatgatacagggccagaccattaacgtaaacgttaatactgaaggc
tcatatgatgggaggattaaagtcatctcgctggtagtcgcatataatgatggcgacagc
gaccagatacagtactggattaaccaggggcatgacgtgtgctcatactattgtgaggac
cattacgatgaggtggctgttggtactacgacgtttaatacccagggtatcgggcctata
tcatcagccacccttgcaattgattatatggcaagcaacagcgggttctatggtttcccg
accagcgataataatttcgtagcttccacgaaaactggaaatttcacaaaccaggagctt
gacaggactccagatgtccagggagcctattctggagtaaaaacttgggatgtcaccagc
ctgataaacggtagcagcgacgtgaccttcgcatattcaaggtatctgccagcaacgggc
atagcagggttcttcaagctacccctcgccatacttaaagtgcagcacctgacagcagct
acatcgcctgtcgcccagttcacgtcaaatgtgacgtccggcgtgacgccgctcaccgta
cagttcaccgaccagtcaacagggagcataacaggctgggcctgggacttcgacaacgat
ggcatggtggacagtacagaacaaaacccagtctatacgtataatgccccgggcacgtac
acggtcaacctcacagtcacagggccagggggaagcgatagcgaaatcaagacagactac
attacggtaagtttggcggcgcctgtcgcagatttcactgctaatgtaacgagcgggaac
tcgcctctaatcgttagtttcactgaccgtagcacaggtaatatcaccagctgggcctgg
gacttcgacaacgatggcatggtggacagtacagaacaaaacccagtctacaacttctcg
gtgggaggctattacacagtaaacttaactgtaacaggtccaggcggctctaacagtacg
ataaaggctaattatataaccgcaaagtgcaatcttaaagtctacacccttccgatgctg
gatggctcatcagtatttgccaaagagaccaaccggatcaggattggggtacaaaattta
gtgggctattcgcccacaacagaaatattaattaatgccagcgatggatggtcaggccgt
ataacagtgcctgaaatggccacaatgagtggttcgaaatatattttattaaatataacg
gaccccaccatccgtccgcttcagggcggtacggtaacttatacggcagtcattgacccg
gataatcttgtaccggaaacacttgagaccgataacactaagacagtaacacgtaacgta
ctatataatgggtataaaggcgcccattactgggaaggcaaggagaacgttaccactcac
aggacctatgaccttaagggcggtctcgtctactcatttgggaacagttcctaccggtca
ggaagctttggcgtgggcggatggaccaactatacggtaggatggacgcccgaaaacctc
acgataccggcgggcgcgacagtcagggaagtacggctatacgtgccatacacatgggat
gactcattcgtagcacctgacaatgtaacggttgacttcaatggagtcagagtaccctat
gaacactgggagcacgatcagtccaactttggcgcgtactcgaattttgtatatggctta
ataacctataacgtgaccgatctgtacagaaagaacgactttaacgaggtcgtcttcaca
cgtaatagcagttcgaccgcaaagatatcgatgtacggcttcatgctggccgtagtctat
gaagatcagaacgcctcaaggaagcagatattccttaacgagggctttgacctgctgggc
gcgagccagaacgactatggcacaaccgaagaagaggcaacggcatacataccatttacg
ggtatggacatagacgtagcgaacgctacaagggctatccttattacgacatgcccttca
ggagcaccacagaatacgggtgacccgggtgagggtaacctgatagtgaatggccagcag
atagggcaccttgtatggagctatggccaggagacaacgggagaaagcgattcttcacag
gtagcagtcgatgtgagagatataaaagaatatcttaacgctactggaggcccaaacctg
gttggcatgcagagcactgcaggagcatcgccatgcatgtgtgccgcgcaggcgttcctc
gtcgtagaatacccgtatgaggcaccagccgctaatttcacgtcggacattacgggtggc
atggccccgctcaccgtgcagttcaccgaccgtagcacaggtaatatcaccagctgggcc
tgggacttcaacaacgatggcatagtggacagcatagaacaaaaccccgtccacacgtat
aatgctccgggcacgtatacggtaaacctcacgattacggggccgggagggagcgatagc
gaaatcaagacagactacattacagtaagccagccgtcgatgccggacctggtgatcact
gcagtctcgccgaacaagggggcgggggactgcctctttgccaacgagtccaacctgata
aacgttactgtgaaaaaccagggcaatgcatcctcggcggcattcacggtaagccttgac
atcgataggatgatatacaacgcatcagtaaacagcctcgaagccggagcttctataaac
attacatttagcgataccacaatacgcgtggccggctcgaatgtgactgtcaccgcgact
gcagactccacggacgccgtgacagagtccaatgagactaacaactcgcttatatcggcg
ctgacagtgtacaataacggctacaagggcaagcggtacacgggcggcagcgatataagc
acgcaggcgacattcgaggggaggatcgatgttaaatattccagcggcaatgccgcctac
aattctgcaaactggaccgcgaaggtgtacaactggtcctcatcagatatccagataccg
ccaggggccactgtcctgagcgccaggctttaccagggatacacgtggaataagatgaca
accgaccctgcgttcaccatgtcctttaacgggaacgtggtgacgccgatagcgacgtac
aaggaccgcaaaggctacgggacctccgactatccgcagggcgtctacgtctacgacgtg
accggcctgttcaatgcatcgggcaacagcataaccattacccccgaggcggggaacaac
tacggcatctacggcgcatacctcgtggtagtatacgaagataacaatgctacctggaag
aaagtctggatcaacgatgagtgcgatatcctggcgtctaagagcacttattcggtcacg
agcgatgaggccaccgcctacgcgaccttcgcaggcgtcaacaatagcgatgtgaagagc
gccagggcgatcgccatcctctcgagcgcggccgatacgggcaagagcaagttcttcttc
aacggaaatgagtatacgggattctggcaggattacatgacatctccgcagattggcttt
tcagcgtatgacgtgaaggacgcactggccagcggcgataacacggcaagactccagagc
tatgataccggcaatggaggagatagcatgtatgcccagaacgtgatactggtcgtagag
cacgccgaggaggcgccggtggcagacttcacggccaacgtgacttcaggaacggcgcca
ctcaccgtacagttcaccgacctttccaggaatgccacgtcgtgggcctgggacttcgac
aacgatggcatagtggacagcacagaacaaaacccggtacacacgtacgcatctgctggc
acttacacggttaacctcaccgtggcagggcctggcggcagcgactccgaggctaaagcc
gattatataaccgtatctccatcgatcgttaccatatccatcgtgccctcctcggagaac
gcgcccgtcgacggtacaagagctatagacatcgtagcgctttcgctgccgctggggcta
tccgggtatgcgttgaacgtgtcccttgataatgcaagcgttggcgaggtagtcaacgtt
agctacccggcgtgggcggctctgaactctacgacgacgctaccaggcgacaacgtgcgg
ataagcggcgtagacctgaacaagctagtagagcctggcgcatcgaacgttacgcttgcc
accataacgctgagaggagacgcgccaggaatgacaggcgtcatgatagatggagtccat
atggacgatgacgcaggctctgccattcttggggcgacgaataatggaagcttcaccgtc
tacacgtacgttgtcgccaatttcacggctaacgcgacctcgggcactgccggcccgctc
tccccattcatggtgagcttcacagaccttaccaccggcgcccccggaccgacatcgtgg
cagtggaacttcggcgacgggaacaccacgaccgaacaaaaccccacgcacgcctacacg
acgtcgggcaactacacggtaagcctcacggcagcaaaccagtacgcggaagacactaaa
accatcgtagactacattaaggtaaggccttatgtggaagcgttccccggccactcaaac
gccccattggaccctgacgatgacttcctctttgaggacgtgaatggcaacggcaaactg
gacttcgacgacgtggtcgtattattccagaacgtggagtgggtagagaacaatgccagg
gtcggcgtaggcccatacgactacaaccacaatgacaggatcgatttcgacgacatcgtc
cagctatactgggaaatactagaggtgatataa
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integrated database retrieval system
