KEGG   Methanocella conradii: Mtc_1998
Entry
Mtc_1998          CDS       T01774                                 
Name
(GenBank) Superfamily II DNA and RNA helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
mez  Methanocella conradii
Pathway
mez03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mez00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Mtc_1998
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mez03019]
    Mtc_1998
   03009 Ribosome biogenesis [BR:mez03009]
    Mtc_1998
Enzymes [BR:mez01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     Mtc_1998
Messenger RNA biogenesis [BR:mez03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     Mtc_1998
Ribosome biogenesis [BR:mez03009]
 Prokaryotic type
  rRNA helicases
   Mtc_1998
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 AAA_22 CMS1
Other DBs
NCBI-ProteinID: AFD00738
UniProt: H8I691
LinkDB
Position
1904712..1906082
AA seq 456 aa
MVMFQELSLSAPTLKAIAAMGFEEATPIQGQAIPAALQGRDVIGQAQTGTGKTAAFGIPM
VEAVDIKSEAIQGIVITPTRELAVQVAEELNRIGHFKGVHALPIYGGQDIKRQVSALKRK
PQVIVGTPGRLIDHMKRKTVRLGGIRMVVLDEADEMLDMGFIEDIERILKATPEGRQTLL
FSATIPAPISKLAARFMKDPVSIGIKSRSLTVQGTEQAYLEVQERQKFEALCRLLDVQLP
ALAIVFVRTKRRVDELARALSERGYQAEGIHGDLAQSKRDSVMRSFREGATEVLVATDVA
ARGLDISGVTHVYNFDIPQDPDGYVHRIGRTGRAGKKGIAITFVTPRELGLLRLIERVTR
RPIERRPVPTAAEAFEGKQRAIVEALLKVSEEGDVSRYRGVAESLLEENDSVTMLSAALK
MLSKGDDAEAIPVELTEEHRRHKMERKPKGRRAQKR
NT seq 1371 nt   +upstreamnt  +downstreamnt
atggtaatgtttcaagaattatctctaagcgcgcccacgctaaaggctattgcagccatg
gggttcgaggaagcgacgcccatccaggggcaggccatacctgcggccttacagggcagg
gacgtcatagggcaggcccagacgggcaccggcaagacggcggcattcggcatacctatg
gtcgaggcagtagacattaaatcggaagccatacagggcatagtcataaccccaacaagg
gagctggccgtacaggtggccgaggagctaaacaggatcggccattttaagggcgtacac
gctcttcctatttatggcggccaggacatcaagcggcaggttagcgccctcaagcgaaag
ccacaggtcatcgtcggcacgcccggccggctcatagaccatatgaagaggaagaccgtc
aggctaggcggcataaggatggtcgtgctagacgaggccgacgagatgctggacatgggg
ttcatcgaggacatagagcgcatcctcaaggccacgccggaaggcaggcaaaccctccta
ttctcagcaaccatacccgcccccatcagcaagctagccgcccgcttcatgaaagaccct
gtatccattggcatcaagtctagatcgttgacagtgcagggcaccgagcaggcttacctg
gaggtacaggaaaggcaaaagttcgaggccttatgccgcctattggacgtgcagcttccc
gcgctggccatagtatttgtaaggaccaagcggcgcgtcgacgagcttgcgagggcgctg
agcgagcggggataccaggccgagggcatccacggcgacctggcccaatcgaagcgggac
agcgtcatgcgctcttttagggaaggggcgactgaggtgctggtggccacagatgtcgcc
gccaggggattggatataagcggcgtgacgcacgtctacaacttcgacatcccgcaggac
ccggacggatacgtccacaggatagggcggacgggccgggcggggaagaagggcattgca
attactttcgtgacccccagggagctggggcttttaaggcttatcgagcgggtgactcgc
cgccccatcgagaggaggcctgtgccgaccgctgccgaggcctttgaggggaagcaaagg
gccatagtcgaagcccttctaaaggtgtctgaagaaggcgatgtttcccgatataggggc
gttgccgagagccttctagaagaaaacgactcagtcaccatgctttccgccgcgctaaaa
atgttgagcaaaggagacgatgcagaagccatccctgtcgagcttaccgaggagcaccgc
cgccataagatggagcgaaagccgaaaggccgtcgagcgcaaaaacgctga

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