Methanolobus sp. ZRKC1: V7O59_04425
Help
Entry
V7O59_04425 CDS
T12111
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mezk
Methanolobus sp. ZRKC1
Pathway
mezk04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mezk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
V7O59_04425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mezk03019
]
V7O59_04425
03009 Ribosome biogenesis [BR:
mezk03009
]
V7O59_04425
04131 Membrane trafficking [BR:
mezk04131
]
V7O59_04425
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mezk04147
]
V7O59_04425
Messenger RNA biogenesis [BR:
mezk03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
V7O59_04425
Ribosome biogenesis [BR:
mezk03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
V7O59_04425
Membrane trafficking [BR:
mezk04131
]
SNARE
SNARE associated proteins
Others
V7O59_04425
Autophagy
Aggrephagy
Other aggrephagy associated proteins
V7O59_04425
Exosome [BR:
mezk04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
V7O59_04425
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
CDC48_N
AAA_lid_3
AAA_5
RuvB_N
CDC48_2
AAA_14
AAA_16
AAA_2
AAA_22
TIP49
AAA_33
nSTAND3
AAA_28
AAA_7
IstB_IS21
Sigma54_activat
AAA_18
AAA_17
Mg_chelatase
RNA_helicase
Parvo_NS1
nSTAND_NTPase5
ABC_tran
Zeta_toxin
SLFN-g3_helicase
NPHP3_N
PhoH
Vps4_C
NB-ARC
AAA_19
AAA_24
ATPase
AAA_3
ATP-synt_ab
DUF815
ATPase_2
DUF6127
SeqA_N
Motif
Other DBs
NCBI-ProteinID:
WYM85425
LinkDB
All DBs
Position
897785..900022
Genome browser
AA seq
745 aa
AA seq
DB search
MDEVQIKVEKAHPNDFGRGIIRLDPTTLLSLQLSPGDIVEIEGKRKTAAKVWRAERQDWG
QGIVRIDGFIRQNAGVGIGERITVRKAEVVTATKVVLAPPEGVSMEYGDHISEIIKRNIM
KRPLVEGDIIPIISSMTQPMTSQVGGGQAIPLIAVETDPKEEILIIGEFTEIELRQKPVR
GYDGATRGVTYEDIGGLGSEIQRVREMIELPLKHPELFQRLNIEPPKGIILYGPPGTGKT
LIAKAVANESRANFLYIAGPEIMGKYYGESEERIRKIFEEAEDDAPSIIFIDEIDSIAPK
RQNVTGEVERRVVAQLLTMMDGLEERGQVVVIGATNRVDAIDPALRRPGRFDREIEIGVP
DTDDRLEIMQIHTRGVPLAEDVDEEFLDYIAKHTQAFVGADLLALVQEAAMRSLRRALPD
INLEDEDIPQEILESIVVCKDDFENALREIEPSAMREVLVEVPDVRWNDVGGLDKAKQEI
KEAVEWPLTRPDRFVSMGIKPPKGVLLFGPPGTGKTLIAQAVANESNANFISVKGPQMLS
KWVGESEKAIRETFKKARQVAPCIVFFDEIDSIAPMRSAISEDSKVSERIVNQLLTELDG
LEPLKEIVVIAATNRPDIIDPALLRSGRFDRMVLVGQSTYSGRKQIFKIHSKNIPLGDDV
TIDDLASMTEGFVGADIEAVCREAVMLALRENFDSDKVSMKYFKEALNKVRPTLSENLVE
YYEKIQAQFKGGIKKEETSSYIGYR
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagttcagataaaagtagagaaagcccatcctaatgattttggaaggggaatt
atacgtctggatcctactacactcttaagcctccaactctctcccggagacatagttgag
attgaaggaaaaagaaagacagcagctaaggtatggagagctgaaaggcaggactggggc
cagggaattgtcaggattgacggttttatcaggcagaatgcaggtgtaggaattggtgag
agaatcactgtaagaaaagcagaagttgttactgctacaaaagtagtcctggcacctcct
gaaggggtttccatggaatatggagatcatatcagtgaaataatcaaacgtaacataatg
aagcgaccactggtagaaggcgacatcatccctataataagttcaatgacacagcctatg
accagccaggtaggtggcgggcaggcgataccacttattgccgtagaaactgatcctaaa
gaagaaatcctcataatcggagagttcactgaaatcgaacttcgtcagaaacctgttcgt
ggttatgacggtgccacccgcggagttacttacgaagatattggaggactcggttcagag
atacagcgtgtaagggagatgatagaacttccactcaagcacccggaactattccagaga
cttaatatagagcctccaaaaggaattatcctctacggaccacccggaactggaaaaaca
ctgattgcaaaagcagttgcaaatgaatccagggcaaatttcctctatattgcaggccct
gaaatcatgggtaaatactatggagaaagtgaagagcgtatccgtaagatcttcgaagaa
gcagaagatgatgctccttcaatcatatttattgatgaaatagattcaattgcaccaaaa
agacagaacgtcacaggagaagttgagcgcagagttgtagcacagttgcttacaatgatg
gacggccttgaagaaagaggacaggttgttgtaattggtgctacaaaccgtgttgatgca
atcgaccctgcacttagaagacctggtaggtttgacagggaaatcgaaataggagtccct
gacaccgatgaccgtcttgaaataatgcagattcacactcgtggcgtgcctcttgcagaa
gatgttgacgaagaattccttgattatatcgcaaaacacacacaggcatttgtgggtgca
gaccttctggcacttgttcaggaagctgcaatgcgctctctaaggagagcattgccagat
attaatctggaagatgaagatatcccacaggaaattcttgaaagcattgttgtctgcaag
gacgactttgagaatgcactgagggaaatcgaaccttctgcaatgagagaagtgcttgta
gaggtccctgatgtcagatggaatgacgttggtggactggacaaagccaagcaggaaatc
aaggaagctgtggaatggccgcttacaagaccagacaggtttgtgagtatgggaataaaa
ccaccaaagggagttttgcttttcggaccgccggggacaggtaaaacactgatagcacag
gcagttgcaaatgaatcaaatgccaatttcattagtgttaaaggaccacagatgttgtcc
aaatgggtaggagaatctgaaaaagccatacgggaaactttcaagaaagccagacaggtg
gcaccttgcattgtattctttgatgaaatagattcaattgcacctatgagaagtgctata
tccgaggattcaaaggtttcagagagaattgtaaaccagcttctgacagaactggacggc
cttgaaccgttgaaggaaatagtagttattgccgcaaccaacaggccggacatcattgac
cctgcacttttaagatcaggaagatttgacaggatggtacttgtgggacaatctacctat
tcaggaagaaagcagatattcaagatccattcaaagaacattcctcttggagatgatgta
acaatcgatgaccttgcatccatgactgaaggatttgtcggagctgacatcgaagcagta
tgcagagaagctgtaatgctggcattgagagaaaactttgactctgataaggtcagcatg
aaatacttcaaagaagcccttaacaaagtcagaccaacactgtccgaaaatcttgtggaa
tactatgagaaaatacaggcacagttcaagggtggcatcaaaaaggaagaaacaagttct
tatataggatacagataa
DBGET
integrated database retrieval system
