Methylobacillus flagellatus: Mfla_0071
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Entry
Mfla_0071 CDS
T00342
Name
(GenBank) 3' exoribonuclease
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mfa
Methylobacillus flagellatus
Pathway
mfa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mfa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mfla_0071
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfa03019
]
Mfla_0071
03016 Transfer RNA biogenesis [BR:
mfa03016
]
Mfla_0071
Enzymes [BR:
mfa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Mfla_0071
Messenger RNA biogenesis [BR:
mfa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Mfla_0071
Transfer RNA biogenesis [BR:
mfa03016
]
Prokaryotic type
tRNA degradation factors
Mfla_0071
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH_2
OB_RRP5_4th
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
ABE48342
UniProt:
Q1GXD2
LinkDB
All DBs
Position
76119..78263
Genome browser
AA seq
714 aa
AA seq
DB search
MTAIKKTITYGQHELTLETGEIARQADGAVMVSYGDTVVLVSVVGKREVKEGQDFFPLTV
DYQEKTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPLRPLFPEAFYNEVQVVATVMSSD
PEIDADIPAIIGASAALAISGIPFYGPIGAARVGYINGEYVLNPTASQLKETALDLVVAA
TESAVLMVESEAKELPEDVMLGSVVYGHEQMQIVISAINELAAEVGKEPWDWAPPEPNTE
LIAKVEALAGADINEAYKIKSKSARSSKLDEIRSRVLGELITETTSTSEANEIKSIFHNL
EAKVVRSQILNGEPRIDGRDTRTVRPISIRTGVLPRTHGSALFTRGETQALVVATLGTGR
DEQIIDALQGEYADRFMLHYNMPPYATGETGRVGTPKRREIGHGRLAKRALLAVLPSQEE
FGYTIRVVSEITESNGSSSMASVCGGCLSLLDAGVPLKAHVAGIAMGLIKEGNRVAVLTD
ILGDEDHLGDMDFKVAGTESGITALQMDIKITGITAEIMRVALSQAKEGRLHILGLMKEA
VGEQPQELSEFAPRIITMKINPEKIRDVIGKGGAVIRALTEETGTTIDIEEDGTIKIGCT
SAEAGEEAKKRIEAITAEVEVGQVYDGTVLKLLDFGAIVSLLPGKDGLLHISQIAHQRVN
AVADFLKEGQVVKVKVLEVDDKGRVRLSAKALIEAPSAEAPEEPAVAATGADQQ
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
gtgacggcaatcaagaaaacgattacctatggtcagcatgagctgacacttgaaaccgga
gaaattgcacgccaggccgatggtgccgtaatggttagttacggggatacagtggttctg
gtaagcgtagttggcaagcgtgaagtgaaagagggtcaggatttctttccgttgaccgta
gattatcaagagaagacctatgctgccggaaagattcctggtggttttttcaagcgtgaa
gggcgtccttccgaaaaggaaacactgacctctcgcttaattgatcgcccgctacgcccg
ttgttcccagaggccttctacaatgaagtgcaggtggtcgcaactgtaatgtcttccgat
cctgaaattgatgccgatatccctgcaattattggtgcttcagcagctttggccatttct
ggtatcccgttctacggcccaattggcgctgctcgtgttggttatatcaatggcgagtat
gttctgaatccgacagcctcacagctcaaggagaccgcgcttgatctcgtggtggcagct
actgaaagtgctgttttgatggtggagtctgaagccaaggaactgcctgaagatgtcatg
ctaggttcagtggtgtatggccacgagcagatgcagatcgtgatcagtgcgattaatgag
ctggctgccgaggtcggcaaggagccgtgggactgggcgcctccagagcccaacaccgag
ctgattgccaaagttgaggcgctggctggggctgacatcaatgaggcctataagatcaag
tccaagagtgctcgctccagcaagctggacgaaatccgcagtcgagtgctgggtgagctg
atcacggagacaacctcgaccagcgaagcaaatgaaatcaagtccattttccataacctg
gaagccaaggttgtacgtagccagatcctgaatggtgagccacgtatcgatgggcgtgat
acacgcactgtgcgcccaatcagcatccgcactggtgtattgccgcgcacccacggttct
gcactgttcacccgtggcgaaacccaagcattggtcgttgctacattgggtaccggccgc
gacgaacagatcatcgatgcgctgcagggcgagtatgccgaccgtttcatgctgcattac
aatatgcctccatatgccacgggcgaaaccggtcgtgtcggcacaccaaagcgtcgtgaa
attggtcatggtcgtttggcaaagcgtgcactgctggcagtactgccaagtcaggaagag
tttggttataccattcgcgttgtttctgaaatcaccgaatcgaacggctccagctccatg
gcctccgtctgtggtggctgtctctccctgctcgatgcgggcgttccgttgaaagcgcat
gtcgcaggtatcgccatgggcttaatcaaggaaggcaaccgggttgccgtattgacggat
atcctgggtgatgaagatcatttgggtgatatggacttcaaggtggctggtactgaatcc
ggtattactgccttgcagatggatatcaagatcaccggaattactgcggaaatcatgcga
gttgcattgtcacaagccaaggagggccgtttgcatatcctcggcctgatgaaggaagct
gttggcgagcagcctcaggaactttccgagtttgcaccacgtatcatcaccatgaaaatt
aatcctgagaagatccgtgatgtgatcggcaaaggcggcgcagtgattcgtgcattgacc
gaagaaacaggcaccactattgatatcgaggaagatggcacgatcaagattgggtgcacc
agtgccgaagcaggggaagaggctaagaagcgtattgaagcgatcactgctgaagtagaa
gtggggcaggtttatgatggtacggtccttaagttgctggatttcggtgcgattgtttca
ctgctgccaggtaaagatggtttgctgcatatctctcaaattgcgcaccaacgtgtgaat
gccgtggccgattttctcaaggaaggccaagtggtgaaggtcaaggtattggaagtggat
gacaagggccgcgtgcgtctgagcgctaaggcattgatcgaagcacctagtgccgaagcg
ccagaagagccagcagtagctgcaacaggggcggatcaacagtag
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integrated database retrieval system
