Methylobacillus flagellatus: Mfla_0558
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Entry
Mfla_0558 CDS
T00342
Name
(GenBank) DNA topoisomerase, type I, putative
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mfa
Methylobacillus flagellatus
Brite
KEGG Orthology (KO) [BR:
mfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mfa03032
]
Mfla_0558
03400 DNA repair and recombination proteins [BR:
mfa03400
]
Mfla_0558
Enzymes [BR:
mfa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Mfla_0558
DNA replication proteins [BR:
mfa03032
]
Prokaryotic type
DNA Topoisomerases
Mfla_0558
DNA repair and recombination proteins [BR:
mfa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Mfla_0558
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
ABE48828
UniProt:
Q1H3V9
LinkDB
All DBs
Position
complement(580716..581828)
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AA seq
370 aa
AA seq
DB search
MPDIKKEKCATQLSETLGSELHGDMALSAQAARLRYMQDDKPGFGRKRTAKGFRYVDTQG
RPIKDEKQLARIRSLAIPPAWEKVWICPYANGHLQATGYDARQRKQYRYHKAWRAIRDKA
KFEHIIDFALHLPAIREHIDADLAQPGLTRDKVLALVVSLLETTMIRVGNDEYARSNRSF
GLTTLRNRHVEVNGGRIAFRFKGKSRVEHAIEIQNARLARLVRKITELPGQELFQYIDDD
GKRHAIDSSDVNDYLKRITGRDYTAKDFRTWSGTVQTFHTLSAAEPFENQSQAKKNVLAA
ITEAARKLGNTPSICRKCYVHPLIIDIYMTGKLFAALRKHSQPQQLDAWQAAEQDVLALL
QRHAGVKQPA
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgccggatatcaagaaggagaagtgtgcaacacaactcagtgaaacgctgggcagcgag
ctgcatggcgacatggcgctgtcagcgcaagccgcgcgtctgcgctatatgcaggatgat
aagcccggctttggtcgcaagcggacagcgaagggatttcgctatgtggatacgcagggc
cgaccgatcaaggacgaaaagcagctggcccgcatccgctcgcttgccatccccccggcc
tgggaaaaagtgtggatatgcccctatgccaacgggcacttgcaagctaccggctacgac
gcccggcaacgcaagcagtaccgctaccacaaggcatggcgagcgatccgagataaagcc
aagttcgagcacatcatcgattttgccctgcacctgccggccatccgggagcacatagat
gccgacctagcgcaacccggtctgacccgtgacaaggtactggccctggtggtttccttg
ctggaaaccacgatgatacgcgtcggtaacgacgaatatgcgcgcagcaatcgctcattc
ggactgaccaccctgcgcaaccgccacgtggaggtcaacggaggacggatcgcctttcgc
ttcaagggcaagagccgggtagaacatgcgatcgagattcagaatgccaggctggcgcgg
ctggtgcgcaagatcacggagttgcctgggcaggagctgttccagtatatcgatgacgac
ggcaagcgtcatgccatcgactccagcgatgtcaacgactacctcaagcgcattaccggg
cgcgactacacggccaaggatttccgcacctggtcgggcacggtgcagaccttccacacg
ctatcggccgccgagccgttcgagaaccagtcgcaggccaagaagaacgtgctggccgcg
attaccgaagccgcgcgcaagctcggcaatacgcccagcatctgccgcaagtgttatgtg
catccgctcatcatcgatatctacatgaccgggaaactgttcgcagccctgcgcaaacac
agccagccgcaacagctcgatgcctggcaggccgccgagcaggacgtgctggcgttgctg
cagcgccacgccggggtgaaacagcctgcctga
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