Methylobacillus flagellatus: Mfla_1097
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Entry
Mfla_1097 CDS
T00342
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mfa
Methylobacillus flagellatus
Pathway
mfa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mfa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mfla_1097
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfa03019
]
Mfla_1097
03400 DNA repair and recombination proteins [BR:
mfa03400
]
Mfla_1097
Enzymes [BR:
mfa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Mfla_1097
Messenger RNA biogenesis [BR:
mfa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Mfla_1097
DNA repair and recombination proteins [BR:
mfa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Mfla_1097
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
RecQ_Zn_bind
Helicase_C
HRDC
ResIII
Motif
Other DBs
NCBI-ProteinID:
ABE49365
UniProt:
Q1H2C2
LinkDB
All DBs
Position
complement(1143010..1144845)
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AA seq
611 aa
AA seq
DB search
MQANTAAQQLLEQTFGYSAFRGEQEAIVNHVVDGGDALVLMPTGGGKSLCYQIPSLLRPG
VGIVVSPLIALMQDQVDALRQLGIQAAFLNSSLDADTARHVYQALMRGELKVLYVAPERL
MTPSFLSTLHDIQQRFGIALFAIDEAHCVSQWGHDFRPEYRQLTVLHEEFPEVPRIALTA
TADTPTRNEIVERLGLEHARQFISSFDRPNIRYRVALKNNARKQLLGFLESEHPNDAGII
YCLSRRKVEETAAWLKEQGWDALPYHAGLDATVRQANQQRFLREEGIIMVATVAFGMGID
KPNVRFVVHLDLPKSMEGYYQETGRAGRDGLDADAWMVYGLGDVVNMRQLLDGSDTPEER
KRLERQKLDALLGFCESTACRHQAILRYFGEQHPGNCGQCDNCLSPVDTWNGTEAARMAL
SCVFRSGQRFGAGHLIDILLGKTTEQIKRFNHQSLSTFGIGKALNQAQWSSVFRQLVASG
LLSTDMEGYGGLRLTEEARPLLRGETEIWLRSDPPDVRASSSKAERASRSREAYNEVQDD
PLWLALKAKRLELAREQEVPPYVIFHDSTLLEILNQKPGSLPEMGRISGIGAAKLARYGD
AFLEVLEEYAH
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcaaacactgccgcccagcaactgctggagcaaacttttggctatagtgccttt
cgtggcgagcaggaagccattgtcaatcatgtggttgacggtggcgacgcgctggtgctc
atgccgacaggtggcggcaagtcgctctgctaccagattccctctctgctgcgaccaggc
gtcggcattgtcgtttccccgctgatcgccttgatgcaggaccaggtggatgccctgcgc
cagcttggcatccaggcggccttcctcaattccagcctggatgccgataccgcacgccat
gtttatcaggccttgatgcgcggagagctgaaggtgttgtacgtcgcgccagagcggctc
atgacaccgagctttctcagcaccctgcatgacatccagcagcgcttcggtattgccttg
ttcgcgatcgacgaagcgcattgcgtatcgcaatggggacatgacttccggccagaatac
cgtcagttgacggtgctgcacgaggaattccccgaagtaccgcgcatcgcgcttaccgcc
actgccgatacgccgacccgcaacgaaattgtcgagcgcctgggactggagcacgcgcgg
caattcatttccagctttgaccgccccaacatccgctaccgcgtagcgctgaagaacaac
gcccgcaagcagttgctcggcttcctcgaatccgagcaccccaacgacgcgggcatcatc
tattgcctgtcgcgccgcaaggtggaggaaacagcagcctggctcaaggagcagggctgg
gatgcactgccctaccatgcgggacttgacgccacagtgcgccaggccaaccaacagcgc
ttcctacgtgaggaaggcatcatcatggtcgccaccgtagccttcggcatggggatagac
aagcccaacgtgcgcttcgtcgtccatctcgacctgcccaagagtatggaaggctattat
caggaaaccgggcgcgctggccgcgacggcctggatgcggacgcatggatggtgtatggc
ctgggtgacgtggtcaatatgcgccaattgctcgacggcagcgacacgccggaggagaga
aagcgcctggaacggcagaagctggacgccctgctgggcttttgcgaatccacggcctgc
cgccaccaagccatcttgcgctactttggtgagcagcacccgggcaattgcggacagtgc
gacaactgcctcagcccggtggacacctggaacggcaccgaggcagcccgcatggcactc
tcatgcgtgttccgcagcggtcaacgcttcggcgcgggccacctcatcgatatcctgttg
ggcaagacgacggagcagatcaagcgcttcaaccaccagtcgttgtctaccttcggcatc
ggcaaggccctgaaccaggcgcaatggagcagcgtgttccgccagctggtggcgtccggg
ctactctccaccgacatggaaggctacggcggcttgcgtcttactgaggaagcccgacca
ttgctgcgcggggaaacggaaatctggctgcgcagcgacccacccgatgtgcgtgcaagc
tcaagcaaagccgagcgcgcgagccgcagccgcgaagcctacaatgaagtgcaggacgac
ccgctctggctcgcactcaaggccaagcggctggagcttgcccgcgagcaggaagtgcct
ccctatgtcatttttcacgacagcaccctgctggaaatactcaaccagaaacccggcagt
ctgccggaaatgggccgcatcagcggcataggcgcggccaagctggcacgatacggggac
gcgttcctcgaagtactggaagaatatgcccattaa
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