Methylobacillus flagellatus: Mfla_1212
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Entry
Mfla_1212 CDS
T00342
Name
(GenBank) ATP-dependent helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
mfa
Methylobacillus flagellatus
Brite
KEGG Orthology (KO) [BR:
mfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfa03019
]
Mfla_1212
Enzymes [BR:
mfa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Mfla_1212
Messenger RNA biogenesis [BR:
mfa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Mfla_1212
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_19
AAA_22
T2SSE
nSTAND3
NACHT
AAA_25
AAA_30
SLFN-g3_helicase
AAA_16
ResIII
TsaE
PhoH
Motif
Other DBs
NCBI-ProteinID:
ABE49480
UniProt:
Q1H207
LinkDB
All DBs
Position
1267607..1271737
Genome browser
AA seq
1376 aa
AA seq
DB search
MTTTSSINERQVLKHLQAQLPDCLLLDRFHLKRRLQQVGAMLEQGKPVDKLMTELATKVQ
TSLQRRQLRQEQLPKPEYPAELPVSARKDEIAQAIAKHQVVIVSGETGSGKTTQLPKICL
ELGRGVAGLIGHTQPRRIAARSVASRIAQELKSPLGEAVGYKVRFNDRLSETTYIKLMTD
GILLAETQGDRFLNAYDTIIIDEAHERSLNIDFLLGYLKQLLPRRPDLKVIVTSATIDAE
RFSRHFNGAPVIEVSGRTYPVEIRYRPLGSRRMVVAPPAPVAAPVPVVAQKEEAPQEDII
DIGIKRKAGNIDPSIRKWLEDDNDVEVLGQDIMGIQRKPRAEAKWLEEDDAEEAMEEAIL
DSVEQLSRLGGGDILVFLPGEREIRETADYLNKHLRHVEILPLFARLSIEDQQKVFRSSG
GRRVVLATNVAETSLTVPGIKYVIDTGLARVNRYSARAKVEQLQVEKISQAAARQRAGRC
GRVSNGICIRLYDEADFNHRPEFTDPEILRSSLAAVILRMAALKLGNVQDFPFIEAPSSR
YIADGYQLLQELGAVDAEQNITDTGRQLARLPLDPRVSRMILEGKKQGCVREILIIASAL
AIQDPRERPMDKREAADQAHAKFNVEHSDFLGFIKLWEWYEDALKTKKSNKDLLNKCHSN
FLSFLRLKEWRELYQQLREIAEELELKLNEQPASYEQVHRALLAGLLGNIGFKDGEADNY
LGARGIRFHIAPGSTLKKARPKWVMAAELMETTKLYARCVARIEPDWIEPLARGLTQSHY
SDPRWDRKAAQVVAWERVSLYGLTVVPRRRVHYGPINPQESREIFIREALANMEFDTRAP
FFAANRKLIAEIEELEHKARRQDVLVDEHTLFAFYDAIIPAGIVNGAGFEKWRQEAERET
PRLLYLTRDHLMRHGAAGVTEVQFPESLELDGVKLPLKYRFEPGHPLDGVTATVPLALLN
QLNPVEAEWLVPGMIREKVTALIKALPKTLRRVCVPVPDFVTGFLETATRKDGALLPALA
SYIQQRTGLKLSASEWQADALDAHLYMNFRVVDEKNRELGSGRDWHALKAQLGQAAQLTF
RSNSPGIEKAGLKQWDFGDLPPTLSFSRDGRQLTGYPALEDNGDSVAIKLFDTELAARQS
HRAGVRRLMRFELKEQMKQLEKGLPGFNQYALQLRSIMSPEELREDMLVAISDRAFIGED
ELPRNSQDFMALKARARTRLPAVVEGAGRLATAIATEYTQLTQKLNAAPASLSRVKKELE
GQLARLLPKRFFSATPWDTLQHLPRYIKAMRLRLEKYPGAIERDTRSGQAVQQIWERWES
HVQGLRKANQEVPPAVLDYRWLIEELRVSLFAQELKTPFPVSVKRLDKAWEDMVRA
NT seq
4131 nt
NT seq
+upstream
nt +downstream
nt
atgacgacaaccagttctatcaatgagcgccaagtgctgaagcacttgcaggcgcaactt
cccgattgtttattgcttgaccgcttccatttaaagcgccgtttgcagcaggttggtgcc
atgctggagcagggcaaaccggttgataaactgatgacagagctggcaacaaaagtccag
acctctcttcaacgccgacagttaaggcaggaacagttacctaagcccgaatatccggct
gaattgcccgttagtgcacgcaaggatgaaattgcgcaggcgattgccaagcaccaggtg
gtcatcgtgagtggggagacaggctctggtaagacgacacaattgccgaaaatctgcctt
gagctggggcgtggtgttgccgggttgatcgggcatactcagccgcggcggattgctgcg
cgctcggtggcgtcgcgcattgcacaggagctgaaatccccattgggcgaggcggtaggt
tacaaggtgagattcaacgaccgactctcggaaaccacctatatcaagctgatgacggac
ggtattctgcttgcggaaacgcagggtgaccgtttcctcaacgcctacgacaccatcatc
atcgacgaggcgcacgagcgcagcctgaatatcgattttctgcttggctatctcaagcaa
ttgttgccgcgccggcctgacctcaaggtgattgtcacctcggcgaccattgatgccgag
cgcttttcacgccatttcaacggcgcgccggtgatcgaggtctccgggcggacttatccg
gtggaaatccgctaccgacccctgggcagtcgccgcatggtggtggcgccgccagcgcca
gtcgctgcgccggtgccagtcgtggcgcaaaaagaagaggcgccgcaggaggatatcatt
gatatcggcatcaagcgcaaggcaggcaatatcgatccttccatccgcaaatggctggag
gacgataatgacgtggaggtgctgggtcaggacatcatgggcatccagcgcaagccgcgt
gccgaagccaaatggctggaagaggacgatgccgaggaagcgatggaggaggcgatcctc
gattccgtggagcaactgtcgcggctcggcggcggcgacatcctggtgttcctgccgggc
gagcgcgagattcgcgagacggcggattacctcaacaagcacctgcgccatgtggagata
ttgcccttgttcgcgcgcctctccatagaagaccagcagaaagtattccgctccagcggc
gggcggcgcgtggtgctcgccaccaatgtcgccgagacttcgctcaccgtgccgggcatc
aagtatgtgatcgataccggtctggcgcgggtcaaccgttacagcgcacgcgccaaggtc
gagcaattgcaggtggagaagatctcccaggcggcggcgcgtcaacgagccggtcgctgc
ggacgcgtgtccaacggtatctgtatccggctgtatgacgaagcggatttcaatcaccgt
cccgaattcaccgatcccgaaatcctgcgatcctcgctagccgctgtcatcctgcgcatg
gctgcgctcaagttgggcaacgtgcaggactttccattcatcgaagcaccaagctcgcgc
tatattgccgatggctaccagctattgcaggagctgggcgcggtggatgcagagcagaat
atcaccgataccggacgtcagttggcgcgcctgccgctggatccacgcgtctcgcgcatg
atcctggaaggcaagaagcagggctgtgtgcgtgaaatcctcatcatcgccagcgcgctg
gcgatacaggatccgcgagagcgtcccatggacaagcgcgaggcggctgatcaggcacat
gccaagttcaatgtcgagcattccgattttcttggcttcatcaagctgtgggagtggtac
gaagacgcgctcaagaccaagaaatcgaacaaggacttgctcaacaagtgccacagcaat
ttcctctcgttcctgcgactcaaggagtggcgcgagctctaccagcagctcagggaaatt
gccgaggagcttgaacttaagctcaacgagcagcctgcttcctatgagcaggtgcaccgt
gccttgcttgccgggttgctcggcaatatcggtttcaaggatggcgaagcggacaattat
ctcggcgcgcgaggcatccgtttccatatcgcgccgggttccacgctgaagaaagcgcgg
cccaagtgggtgatggccgccgaattgatggaaaccaccaagctctatgcgcgctgtgtg
gcgcgtatagagccggactggatagagcccctggcgcgcggcctgacacaaagccactat
agcgacccgcgctgggaccgcaaggctgcccaagtcgtggcatgggaacgcgtgagcctg
tatggcctcaccgtggtgccgcgccgccgcgtgcattacggcccgatcaatccccaggag
tcgcgagagatattcatccgcgaggcattggcgaacatggaattcgatacgcgtgcgccg
ttctttgccgccaaccgcaagctgattgcagagatcgaggagctggagcacaaggcgcgg
cggcaggatgtgctggtggacgagcatacgctgtttgcgttctacgatgccatcattccg
gcaggcatcgtcaatggtgcaggattcgaaaaatggcgccaggaggcggaaagggaaacc
ccgcgcctgctgtacctcacgcgcgaccacctgatgcgtcatggcgcagcgggtgtgacc
gaggtgcagttcccggaaagcctggagctggatggcgtgaaactgccgttgaaataccgt
ttcgagccgggccatccgcttgatggcgtgacggcgaccgtgccgctggccttgctcaat
cagctcaacccggtcgaggcggaatggctggtgccgggcatgatacgcgagaaggtcacg
gcgctgatcaaggcgctgcccaagacgctgcgacgtgtctgcgtgccggtgccggatttc
gtgaccggcttcctggaaaccgcaaccaggaaggacggcgcattgttgcctgcattggcg
agctatatccagcagcgcaccggcttgaagctgagtgccagcgaatggcaggccgatgcg
ctggacgcgcacctttacatgaacttccgcgtggtggacgagaaaaaccgcgagcttggc
agcggccgcgactggcacgcactcaaggcccagcttggccaggccgcgcagctgaccttc
cgcagcaattcgcccggtatcgagaaagccggcctcaagcaatgggatttcggcgacttg
ccgccgacattgagtttcagccgtgacgggcgccaattgactgggtacccggcgctggag
gacaacggcgacagtgttgccatcaagctgttcgataccgagctggccgcgcggcaatcc
caccgggcaggagtacgccggttgatgcgtttcgagctcaaggaacagatgaagcaactg
gaaaaaggcctgccgggcttcaatcaatatgccttgcagttgcgcagcatcatgagtccg
gaagagttgcgcgaggacatgctggtcgcgatcagtgatcgcgccttcatcggcgaggat
gagcttccgcgcaacagccaggacttcatggcattgaaagcccgtgcccgcacgcgccta
ccggcagtcgtggagggcgcaggccggttggcaaccgcaattgctacggaatacacgcag
ctcacacaaaagttgaacgccgctccggccagcctgtccagagtcaagaaggagctggag
ggccagcttgcgcgcttgctgcccaagcgttttttcagtgcgacgccttgggataccctg
cagcacctgccacgttatatcaaggccatgcggctgcgtctggagaaatatcccggcgcg
atagagcgtgatactcgcagcggccaggccgtgcaacagatctgggagcgctgggaatct
catgtgcagggattgcgcaaggcaaaccaggaagtgccgccagccgtgctggactatcgc
tggctgatcgaggaactgcgcgtttccctgtttgcgcaggagctcaaaacaccgttcccg
gtatcggtgaagcgcttggataaggcctgggaagacatggttcgtgcttag
DBGET
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