Methylobacillus flagellatus: Mfla_1257
Help
Entry
Mfla_1257 CDS
T00342
Name
(GenBank) DEAD/DEAH box helicase-like protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
mfa
Methylobacillus flagellatus
Pathway
mfa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mfa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mfla_1257
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfa03019
]
Mfla_1257
Enzymes [BR:
mfa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Mfla_1257
Messenger RNA biogenesis [BR:
mfa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Mfla_1257
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
ERCC3_RAD25_C
Cas3-like_C_2
Utp25_C
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
ABE49525
UniProt:
Q1H1W2
LinkDB
All DBs
Position
complement(1330696..1332078)
Genome browser
AA seq
460 aa
AA seq
DB search
MNAQPEDNVNTDTISFASLNLAPELLKALDESGYTTPTPIQAQAIPVVLEGSDLMAGAQT
GTGKTAAFTLPLLQKLLPLASSSASPARHPVRALILTPTRELAIQVEESVKTYAKHTPLR
SLVVFGGVDIKSQTPTLMKGVEILVATPGRLLDHVEQRTVQLGQVQMLVLDEADRMLDMG
FMPDLKRILALLPKQRQNLMFSATFSPEIKKLSEEFLTKPVLIEVARSNATSENVTQKIL
LVESEHKQHVLADLLRKEATQVIVFTKTKLSASRLARHLEREGIAAGAIHGDKSQLERIQ
ALDAFKQGKITALVATDVAARGLDIDQLPMVVNYELPSAAEDYVHRIGRTGRAGASGIAI
SLVSSEEEKFLKEIEKLIKRELPKEQANAPQPVRRGQDTQRQKAPASIAPRQRHAGRNKE
DEWFFKPYEPSTDAPAPKPMHSREKSKKEIPALLGGLNRK
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgctcaacccgaagacaacgtgaatacagacactatcagttttgcatcgctcaat
ctggcgcccgagttactgaaggcgctggatgagtcaggctataccacgccaaccccgatt
caggcccaggcgattcctgtcgtgctggaaggcagcgacctgatggccggcgcacagacc
gggaccggcaaaacagccgcctttactttgcccttactgcagaagctgctgccattggcc
agcagtagtgcctcgcccgcaaggcatccggtgcgggccttgatcctgaccccgacccgg
gaactggcaatccaggtggaagaaagtgtcaagacgtatgccaagcatacgccgctacgt
tcgctggttgtcttcggtggagtggatatcaaatcccagacgcccaccctcatgaaagga
gtggagatattggtagccactccagggcgcctgctggaccatgtcgaacagcgcacagtg
cagctgggccaagtgcagatgctagtgctcgatgaagcagaccgcatgctggacatgggc
ttcatgccagatctcaagcgcattctcgcactgctgccgaaacaacggcagaacctgatg
ttttccgcaacattctcacctgaaatcaagaagctttccgaagagttcctgaccaagcct
gtactgatcgaagtcgcccgcagcaatgcgacatcagaaaacgtcacgcaaaaaatcctg
ctggtggaaagcgagcacaagcagcacgtgctggccgacttgttgcgcaaggaagcaaca
caggtcatcgtcttcaccaagaccaagctttccgcaagccgcctggcgcgccatcttgag
cgcgaaggcattgccgccggcgccattcatggcgacaagagccagcttgagcgtattcag
gcgctggatgccttcaagcaaggcaaaatcacagcactcgtggcgaccgatgtggccgca
cgcggcctggatatcgaccagctccccatggtggtcaattacgagttgcccagcgccgcc
gaggactacgtacaccggatcggccgcactggtcgcgccggtgcttccggcatcgccatt
tccctggtatccagtgaggaggagaagttcctcaaggaaatcgaaaagctcatcaagcgg
gaattgccaaaagaacaggcgaatgctccccagcctgtacgccgcgggcaggatacccaa
cgacagaaggctccggcaagtattgctccgcgccaacggcatgctggccgcaacaaggaa
gacgaatggtttttcaagccgtatgagccttccacagatgcgccggcgcccaagcccatg
cattcccgggaaaaatcgaaaaaggaaattcccgccctgctcggcgggttgaaccgcaaa
taa
DBGET
integrated database retrieval system
