Methylobacillus flagellatus: Mfla_1320
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Entry
Mfla_1320 CDS
T00342
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
mfa
Methylobacillus flagellatus
Pathway
mfa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mfa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Mfla_1320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfa03400
]
Mfla_1320
DNA repair and recombination proteins [BR:
mfa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Mfla_1320
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Mfla_1320
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
DALR_1
AAA_22
Kinesin
Motif
Other DBs
NCBI-ProteinID:
ABE49588
UniProt:
Q1H1P9
LinkDB
All DBs
Position
1399474..1401513
Genome browser
AA seq
679 aa
AA seq
DB search
MIVTFPNSKYKLFQPFPPAGDQPAAIEALTAGVNEGLKFQTLLGVTGSGKTYTMANVIAR
TGRPAIVMAPNKTLAAQLYSEFKEFFPQNAVEYFVSYYDYYQPEAYVPSRDLFIEKDSSI
NDHIEQMRLSATKALLEREDSIIVATVSAIYGIGDPGEYHGMVLHIHLGMKISQRDIVNK
LIAMQYERNDFDFSRGTFRVRGDVLDVFPSENSETAVRISLFDDEIENITLFDPLTGQIF
NKIHNFRIFPSSHYVTAREATIRAMETIKQELRERVDFYIKTGKLVEAQRIEQRTRFDLE
MLNEIGFCKGIENYSRHLTGRQPGDAPPTLIDYLPKNALMIIDESHVTVPQIGGMYKGDR
ARKENLVDYGFRLPSAMDNRPLKFEEFERIIPQCIFVSATPAEYEATHQQRIVEQVVRPT
GLIDPEIIVKPADTQVDDLLSEIKLRVEAGERVLATTLTKRMAEDLTDYLSEHGVRVRYL
HSDIDTVERVEIIRDLRLGEFDVLVGINLLREGLDIPEVSLVAVLDADKEGFLRSERSLI
QTAGRAARNLNGKVIFYANKVTRSMKLAMDETQRRRAKQMAFNAEHGITPKGVNKRIKDI
IEGVYSKEDHQRDRKVAEERASYAQMTEKQLVKEMKRLEKAMHESAKNLEFEKAAEYRDQ
LRKLKNNFYGAEVTDELAD
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
gtgattgtcacttttcccaacagcaaatacaagcttttccagcctttccctccagcaggc
gaccagccggcggcaatcgaagcgttgacggctggggtgaacgaaggactgaagttccag
acattgctcggtgtgacgggctccggcaagacgtataccatggcgaatgtcattgcccgc
acgggtcgtcctgcgattgtgatggcgccgaacaagacattggccgctcagctgtattcg
gaattcaaggaattctttccgcagaatgccgtggagtacttcgtctcatactatgactat
taccagccggaagcctatgtgccttcgcgtgacttgttcatcgagaaggactccagcatc
aacgaccatatcgagcagatgcggctgtctgccaccaaggctttgctagagcgggaagac
agtattattgttgccacggtatcagcgatttacggtattggtgatcctggtgaatatcat
ggcatggtgctgcatatccatctgggcatgaaaatcagtcagcgcgatatcgtcaacaag
ttgatcgccatgcagtatgagcgcaacgactttgatttttcccgtggtacattccgtgtc
cgcggcgatgtgctcgatgtgtttccttcggaaaacagtgaaaccgcagtgcgcatcagc
ctgttcgacgacgagattgagaacattaccttgttcgatccattgaccgggcagattttc
aacaagatccacaatttccgcatctttccgtcgagccattatgtgacggcacgcgaggcc
acgatccgcgcgatggaaaccatcaagcaggagttgcgggagagggtggatttctacatc
aagaccggtaagctggtagaggcgcaacgcattgaacagcgtacgcgcttcgacttggag
atgctcaacgaaatcggcttctgcaaggggatcgagaactacagccggcacttgacaggc
aggcagcccggcgatgcaccgccgacattgatcgactacctgcccaagaatgcgctcatg
atcatcgatgagagccatgtcactgtgccgcagattggtgggatgtacaaaggtgaccgt
gcgcgcaaggaaaacctggtcgattatggctttcgcctgccgtcggccatggataatcgg
ccgctcaagttcgaagagttcgagcgcatcattccgcaatgcattttcgtgagtgcgaca
ccggcagagtatgaagccacgcaccagcagcgcatcgttgaacaggtggtgcggcctaca
ggactgatcgatccagaaatcatcgtcaagcctgcggatacacaagtggatgatttgctg
tctgaaatcaagctcagggtcgaagcaggcgagcgcgtattggccacgacgcttactaaa
cgtatggcggaagatctcacggactacctgtcagaacatggcgtgcgggtaagatacctg
cactccgacatcgatacagtagagcgcgtggaaatcatccgcgacctgcgcctgggcgag
tttgacgtgctggtgggcatcaacctgttgcgcgaaggtctggatattcccgaagtatcg
ctggtggcagtgcttgatgctgacaaagagggctttctgcgctcagagcggtcattgatc
cagactgccgggcgcgcggcccgcaacctcaatggcaaggtcatcttttatgccaacaag
gtgacgcgatccatgaagctggcaatggacgaaacccagcgccgtcgtgccaagcagatg
gctttcaacgccgagcacggcattacgcctaaaggcgtcaacaagcgtatcaaagacatc
attgaaggtgtctacagtaaagaagaccatcagcgggaccgcaaggtggccgaagagcgg
gccagttatgcccagatgaccgaaaagcagttggtcaaggaaatgaagcgtctggagaaa
gccatgcacgagagcgcaaaaaatctggagtttgaaaaggctgccgagtatcgcgatcag
ctgagaaagctcaagaataatttctatggtgcggaagtgacggatgagttggcggattga
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integrated database retrieval system
