Methylobacillus flagellatus: Mfla_1321
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Entry
Mfla_1321 CDS
T00342
Name
(GenBank) RNAse E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
mfa
Methylobacillus flagellatus
Pathway
mfa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mfa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mfla_1321
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfa03019
]
Mfla_1321
03009 Ribosome biogenesis [BR:
mfa03009
]
Mfla_1321
Enzymes [BR:
mfa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
Mfla_1321
Messenger RNA biogenesis [BR:
mfa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Mfla_1321
Ribosome biogenesis [BR:
mfa03009
]
Prokaryotic type
rRNA processing factors
Mfla_1321
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
ABE49589
UniProt:
Q1H1P8
LinkDB
All DBs
Position
complement(1401635..1404349)
Genome browser
AA seq
904 aa
AA seq
DB search
MKRMLFNATQSEELRVAIVDGQKLIDLDIESAGKEQRKSNIYKGVITRIEPSLEAAFVNY
GTDRHGFLPFKEIARSYFLNDSDAGRSPRIQDVLKEGQELIVQVDKDERGNKGAALTTFV
SLAGRYLVLMPNNPRGGGVSRRIEGEERNELRDTMAQLQVPSGMSIIARTAGIGRSVEEL
QWDLNYLLQLWTAVESASTIQSGPFLIYQEGSLVIRAIRDYFQPDIGEILIDTPDIYEQA
VQFMNHVMPNNVSRVKLYRDEIPLFSRFQIEHQIESAFAREVRLPSGGAIVIDHTEALVS
VDVNSGRSTKGSDIEQTAFNTNLEAADEVARQLRLRDLGGLVVIDFIDMENQRNQREVEN
RLREALHHDRARVQTGKISRFGLLELSRQRLRPSLGESNHIPCPRCHGTGHIRGIESTAL
HILRITQEEAMKENSAIIQVQLPVEAATFLLNEKRSEIHKIEQRMGVQVVLIPNIHMETP
NYNILRIRHDDVEETGRASYEMVELPSETLETALAQEPKPAKAEAAVKGITPASPAPAAA
REKEKPSSTSLLHRFKSWLASVAAPKPEVKPQEETQQRDSNRNPRRNNRRNERSASERTG
NDRQMQNEQRQEQRKEQRSQQERRPQQAEQRAAQGRQERAERPERNERQPKVQQPQPTPS
LQSETPIEANSEQRGNRRGRNGRRERQPRSDNANRENRQQAAEELHAAAAAPIASVEAAE
RPVEAKTAPTTPEAAPITQVKENTETVHTATEAAPQKEAPAPAIRKDVVVTEESLPAIDA
TAVKETRTKEEKSAHLSEPLAESPADTKQEKPLEALADEAPTEAAKPEKKPRAPRRRKVE
AEKPADLMDSGLQLVETKAEAIQAVIAVEEAPAPRAPRKPAAWQQKAAKEAAVSEELVMV
ETQK
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcatgctatttaatgcgacgcaatcagaagaactacgcgtcgcaatcgtcgac
ggacagaaactcatcgatcttgatatcgagtccgcaggcaaagaacaacgcaagagcaac
atctacaagggtgtcatcacccgtatagaaccttctctcgaagccgcttttgtcaattac
ggtaccgaccgccatggctttcttcccttcaaggaaatcgcccgcagttacttcctgaac
gatagcgatgcaggccgcagcccacgcatccaggatgtgctgaaggaaggccaggagctg
atcgtgcaggtagacaaggacgagcgcggcaacaagggagctgcgctcaccacttttgtc
tcgcttgctggacgctacctggtgctgatgccgaacaaccctcggggtggcggtgtttcc
cgccgtatcgaaggtgaagagcgcaacgagttacgcgacaccatggcgcagctgcaagtc
cccagcggcatgagcatcattgcccgtaccgcagggattggtcgcagtgtggaagaactg
caatgggacctcaactatctgctgcaactatggactgccgttgaaagcgcctccaccatc
cagagcggcccattcctgatctaccaggaaggcagcctggtcattcgcgcgatccgtgac
tatttccagccggatatcggcgagattctcatcgacacgcccgacatctatgagcaagcc
gtgcagttcatgaaccacgtgatgccgaacaatgtatcgcgcgtcaagctctaccgtgat
gaaatcccgctgttttcccgcttccagatcgagcaccagatcgagtccgcctttgcgcgc
gaagtgcgcttgccttccggcggcgcgatcgtcattgaccataccgaggccctggtatcc
gtagacgtcaactctggccgctccaccaagggcagcgacatcgagcagactgcattcaac
accaaccttgaagctgcggacgaagtcgcacgccaactgcgcctgcgcgacttgggcggc
cttgtcgtcatcgactttatcgacatggaaaaccagcgcaaccagcgcgaagtcgaaaac
cgtctacgtgaagcgcttcaccatgaccgcgctcgtgtgcagaccggcaagatctcgcgc
ttcggcctgcttgagctttcgcgccagcgcctacgccccagcctcggcgaaagcaaccat
atcccttgtccgcgttgccatggcacaggccatattcgtggcatagagtcgaccgctttg
catatcctgcgtatcacgcaggaagaagccatgaaagagaacagcgccatcattcaagtg
cagcttcctgtcgaagcagccactttcctgctcaacgaaaagcgttcggaaatccataag
atcgagcagcgcatgggcgtacaggtagtgctgattcccaacatccacatggagactccc
aactacaacatcctgcgcattcgccatgatgatgtggaagaaacaggccgggccagctat
gaaatggttgagctgccgtccgagactctcgagacggcactcgcccaggaaccaaagcct
gcaaaagccgaagccgccgtcaaggggattaccccagcttctcccgcacccgccgcagcc
agggaaaaagaaaaacccagcagcacatccctgctccatcgcttcaagtcttggctagcc
agcgtcgctgcgcccaaacccgaagtcaagccacaggaagaaacccagcagcgcgacagc
aaccggaacccacgccgcaacaacaggcgtaacgagcgtagcgccagcgaacgaaccggc
aacgatcgacagatgcaaaacgagcagcgtcaagagcagcgcaaggaacaacggagtcaa
caggagcgccgcccgcaacaggcagaacagcgcgccgctcaaggccgtcaagaaagagcc
gagcgtccggagcgcaacgagcgccagcccaaggtgcaacagccgcagcccaccccatcg
ctgcagtctgaaactcctatagaggccaacagcgaacaacgtggcaaccgccgcggacgc
aacggccgccgcgagcgccagccccgcagcgacaatgcaaaccgcgaaaaccgccagcaa
gcagcggaagaattgcatgccgcagccgcagcacctattgcatccgttgaggcagctgag
cgaccagtggaggccaagacagcccccaccaccccggaagcagcgcccatcacccaggtg
aaggaaaacaccgagacggtccatactgcaactgaagctgcgccccaaaaggaagcgcct
gcgcccgccatcaggaaagatgtggtcgtgactgaagaaagcctgcctgccattgatgca
acggcagttaaggaaactcggaccaaggaagaaaaatcagctcacttgagcgagccttta
gccgagagtcctgctgataccaagcaggaaaaacctcttgaggcgttggcggatgaagcg
cctactgaagctgcgaagcctgaaaagaagccccgtgcacctcgccgccgcaaggttgaa
gcagagaagccggccgacttgatggattctggcttgcaactggtagaaaccaaggccgaa
gccattcaagcagtcatcgctgttgaggaagcgcctgcgcctcgcgcccctcgcaaacct
gcagcctggcaacaaaaagcggccaaggaagccgcagtcagcgaagagctggtgatggtg
gaaactcagaaataa
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