Methylobacillus flagellatus: Mfla_2065
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Entry
Mfla_2065 CDS
T00342
Name
(GenBank) exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mfa
Methylobacillus flagellatus
Pathway
mfa03410
Base excision repair
mfa03430
Mismatch repair
mfa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mfa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Mfla_2065
03430 Mismatch repair
Mfla_2065
03440 Homologous recombination
Mfla_2065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfa03400
]
Mfla_2065
DNA repair and recombination proteins [BR:
mfa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Mfla_2065
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Mfla_2065
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Mfla_2065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
ABE50332
UniProt:
Q1GZK5
LinkDB
All DBs
Position
complement(2205270..2206964)
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AA seq
564 aa
AA seq
DB search
MVQIVQRNIDQEACQALVDAGVRPTMARLLAARGIRNIGQMEASLSRLIPPERLTGNAEM
AILLADAIAAGKRIIVVGDYDADGATATAVAVKGLLSMGAVVDFLVPNRFEYGYGLTPEI
VALAVGYQPDLILTVDNGIASTDGVNAAQALGIPVLVTDHHLPGAETPRAACIVNPNQHG
CDFPSKHLAGVGVIFYVLLALRAELRRRGAFAAGSEPNLTELLDLVALGTVADLVRLDDN
NRILVEQGLRRIRAGKCSPGVLALFEVAGRDHAKASPQDLGFSIGPRLNAAGRLDDMTLG
IACLLAPDMASARQMAQHLHALNQERRNIEADMQDDALAVLDEIDAAGRYSLSLFRDGWH
QGVIGILASRIKERFHRPVIAFASAGDGIIKGSGRSIAGLHLRDALDLLSKREPGLLLKF
GGHAMAAGLSIREQDFPRFDAAFEQVVSGLLTQQQLEAVIEVDGSLSLEDAGLDMANALE
RQVWGQGFPPPLFLDEFRVVNQRVVGERHLKLSLERAGQVFDAIFFRQEQFLPERVHAVY
QMQVNEFRGTQSVQLCLHHWQDAV
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggtacagatcgtacaacgaaatatcgaccaggaggcctgtcaggcattggtcgacgca
ggtgtccgccccactatggcgcgcctgcttgctgcgcgaggaatacgcaatatcggccag
atggaggcaagcctatctcgcctgattcccccggaaaggctgactggtaatgccgagatg
gccatcctgctggcagatgcgattgcagcaggcaagcgcatcattgtggtcggagattat
gatgctgacggcgcgactgcgacggcagtagctgtcaagggattgctcagcatgggcgct
gtcgtggattttcttgtgcccaaccgctttgaatacggttacgggttgacaccggaaatc
gtggcattggccgtcggctatcagcccgacctgatcctgaccgtggataacggcatcgcc
agtacagacggagtgaatgctgcacaggcactgggtattccggtgttggtgactgatcat
cacctgcctggagccgagactccccgggcggcgtgcatcgtcaacccgaatcaacatgga
tgcgactttccaagtaagcacttggctggtgtcggcgtcatattctatgtactgctcgca
ttgcgcgctgagctgcgccgacggggggcgttcgctgctggctccgaacccaacctgact
gaactgctggacttggtggcactgggaacggtggctgacctggtgaggctagatgacaac
aaccgcatcctggtcgagcagggcctgcgccgtatccgtgcaggcaaatgcagccccggg
gtgctggccttgttcgaggtggcggggcgcgaccatgccaaggccagcccgcaggatctg
ggcttcagtattggcccgcgtctgaacgcggcagggcggttggatgacatgacgctgggg
attgcctgtctgctggcgccggatatggcatcggccaggcagatggcgcagcacctgcat
gcgcttaaccaggagcggcgcaatatcgaggccgatatgcaggatgacgccctggcggtg
ctggacgagatcgatgctgccgggcgctacagcctgagcctgttccgtgatggctggcac
cagggcgtgatcggcattctggcctcccgcatcaaggagcgttttcatcgccccgtgatt
gcattcgcgtctgctggcgacggcatcatcaaaggctccggtcgctcgattgccggtctg
cacctgcgtgatgcgctcgacctgctttccaagcgcgaaccgggattgctgctgaagttt
ggcggacatgccatggccgcgggcttgagcatacgcgaacaggattttccgcggttcgat
gcggcattcgaacaggtggtctcgggtctattgacccagcagcagctcgaggccgtgatc
gaggtcgacggctcattgtccttagaggatgccgggctggacatggcgaatgcactggag
cgccaggtatgggggcaaggatttccgccgccgttgttcttggacgaatttcgcgttgtc
aaccagcgcgtcgtgggagagcggcacctcaagctgagcctggaaagggctggccaagtg
ttcgatgctatctttttcaggcaggagcagttcctgcctgagcgcgtgcatgcggtgtac
caaatgcaagtgaatgagtttcgcggtacacagtccgtacagctatgcttacaccattgg
caggacgcggtctag
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