Myxococcus faecalis: VZP55_04875
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Entry
VZP55_04875 CDS
T11143
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
mfae Myxococcus faecalis
Pathway
mfae02020
Two-component system
mfae02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mfae00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
VZP55_04875 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
VZP55_04875 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mfae03021
]
VZP55_04875 (rpoN)
Transcription machinery [BR:
mfae03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
VZP55_04875 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
XSF05163
LinkDB
All DBs
Position
complement(1209362..1210879)
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AA seq
505 aa
AA seq
DB search
MAMELKQSLKLAQQLVMTPQLQQAIKLLQLSRMELLEQVREEMDQNPLLEQPDEQAPGDV
GDKEPGEASLEADNVEIPRDVELPSASGDNAPEFKADGDGPPEIDWEQYLNSYQFNEPTT
ASNKGNVATDDLPSFEANLVKKEDLVDQLQEQLGTLRLNDAERRIAMLILGNLDDDGYLK
LPDIEGDPLIRLANEADVPMHIAERTLRRIQMLEPRGCGARDLQECLLIQLQGMKEPQAP
LLGLIIKRHMKYLESKNLPAIAKDLKVTLEEVVEAVKLLPKLDPKPGRNFSGDDAQYITP
DVFVYKMGDEYTVVLNDDGLSKLRISGTYRNALKTGAVGPGQTKDFIQDKLRSAVWLIRS
IHQRQRTIYKVTESIVKFQRDFLDKGIAHLKPLILRDVAEDIGMHESTVSRVTTSKYVHT
PQGIFELKYFFNSSIARVSGEDTASEAVKHHIKQLVAQEDARNPYSDQKIVELLRSQGTE
IARRTVAKYREVLNILPSSKRKRYY
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggaactcaaacaaagcctgaagcttgcgcagcagctggtgatgacgccgcag
ctgcagcaggccatcaagctgcttcagctctcccggatggagctgctggagcaggtccgc
gaggagatggatcagaatccactcctggagcagccggacgagcaggcaccgggcgacgtg
ggggacaaggagcccggagaggcgtcgctggaggcggacaacgtcgagattccgcgcgac
gtggagctgccgtcggcctccggggacaacgccccggagttcaaggcggacggggacgga
cccccggagatcgactgggagcagtacctcaacagctaccagttcaacgagcccaccacc
gcgtccaacaagggcaacgtggccacggacgacctgccgtcgttcgaggcgaacctggtc
aagaaggaggacctggtcgaccagctccaggagcagctgggcacgctgcgcctgaacgac
gccgagcgccgcatcgcgatgctcatcctgggcaacctggatgacgacggttacctcaag
ctgccggacatcgagggcgacccgctcatccgcctggccaacgaggcggacgtgccgatg
cacatcgccgagcgcaccctgcgtcgcatccagatgctggagccgcgcggctgcggcgct
cgcgacttgcaggagtgcctgctcatccagctgcaggggatgaaggagccgcaggcgccg
ctgttgggcctcatcatcaagcggcacatgaagtacctggagagcaagaacctgcccgcc
atcgccaaggacctgaaggtcaccttggaagaggtggtggaggcggtgaagctgctcccg
aagctggacccgaagccgggccgcaacttcagcggggacgacgcgcagtacatcaccccc
gacgtcttcgtctacaagatgggggacgagtacacggtggtgctcaacgacgatggcctg
tcgaagctgcgcatctccggcacctaccggaacgcgctgaagacgggcgcggtgggcccc
ggccagacgaaggacttcatccaggacaagctgcgcagcgcggtgtggctcatccgctcc
atccaccagcggcagcggaccatctacaaggtcaccgagagcatcgtgaagttccagcgc
gacttcctggacaagggcatcgcgcacctcaagcccctcatcctgcgcgacgtggccgag
gacatcggcatgcacgagtccacggtgagccgcgtgacgacgagcaagtacgtgcacacg
ccgcagggcatcttcgagctgaagtacttcttcaactcgtccatcgcccgcgtgtccggc
gaggacaccgccagcgaggcggtgaagcaccacatcaagcagctcgtcgcgcaggaggat
gcgcgcaacccgtactcggaccagaagatcgtcgagctgctccgctcgcagggcaccgag
atcgcacgccgcacggtggccaagtaccgcgaggtgctgaacatcctccccagcagcaag
cgcaagcggtactactga
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