Myxococcus faecalis: VZP55_05490
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Entry
VZP55_05490 CDS
T11143
Name
(GenBank) exonuclease SbcCD subunit D C-terminal domain-containing protein
KO
K03547
DNA repair protein SbcD/Mre11
Organism
mfae Myxococcus faecalis
Brite
KEGG Orthology (KO) [BR:
mfae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfae03400
]
VZP55_05490
DNA repair and recombination proteins [BR:
mfae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VZP55_05490
Archaeal homologous recombinant proteins
VZP55_05490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
XSF05279
LinkDB
All DBs
Position
complement(1378340..1379584)
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AA seq
414 aa
AA seq
DB search
MRLLHTSDWHLGHTLYDVSREAEHGAFLEWLLDTLEAQAVDALLVAGDIFDTANPSAEAQ
AAWYQFIAKARRRLPRLDVVVIGGNHDSAARLDAPDPLFAALGVKVVGGLPRAGGVLDLE
RLLVPVHDAKGHVGAWVAAVPYLRPSDLPPVREEVGDRLVAGVRAVYEEVLEAARLRRRP
GQALVAMGHCYMTGSELSELSERKILGGNQHALPVELFPEDVAYAALGHLHKAQRVGGRE
GVRYSGSPLPLSLSEANYRHQVLVVDLKDGVLEAVESVPVPRRAEMVRVPARDAATLEEV
VGLLEALPAMEEGVPDWRRPYLEVCVSLPRPEPALRLKVEKALEGRAARLVKLTPAYTGT
GGALAEARPGLSLRERTPEDVFRARYARDYEEPPSEGLLEAFHTLLTQVQEDAS
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttgctgcacacgtcggactggcatctggggcacacgctgtacgacgtctctcgt
gaggcggagcacggcgcgttcctggagtggttgctggacacgctggaggcccaggcggtg
gacgcgctgctggtggccggcgacatcttcgacaccgccaaccccagcgccgaggcccag
gccgcgtggtaccagttcatcgcgaaggcgcgccggcggctgccccggctggacgtggtg
gtcatcggtggcaaccacgactcggcggcgcggctggatgcgccggacccgttgttcgcg
gcattgggcgtgaaggtggtgggtggactgccgcgcgcgggcggcgtcttggatttggag
cggctgctggtgccggtgcacgacgcgaaggggcacgtgggcgcgtgggtggcggcggtg
ccgtacctgcggccctcggacctgccgccggtgcgcgaggaggtcggggacaggctcgtg
gcgggggtgagggcggtgtacgaggaggtgctggaggcggcgcggctccggcgtcggccg
gggcaggcgctcgtggccatggggcactgctacatgacgggctcggagctgtcggagctc
agcgagcggaagattctcggcggcaatcagcacgcgctgcccgtggagctgttccccgag
gacgtcgcgtacgcggcgctggggcacctgcacaaggcgcagcgcgtggggggacgcgag
ggcgttcgctacagcggctctccgttgcccttgtcgctgtcggaggcgaactatcgccat
caggtgttggtggtggacttgaaggacggggtgctggaggccgtggagtcggtgccggtg
ccgcgtcgggcggagatggtgcgagtgcccgcgcgggacgcggcgacgctcgaggaggtg
gtggggttgctggaggcgctgccggcgatggaggagggcgtgccggactggcggcgtccc
tatctggaggtctgcgtctcgttgccccggcccgagccggcgctgcgcctgaaggtggag
aaggcgctcgagggacgcgcggcgcggctggtgaagctgacgcccgcgtacacggggaca
gggggcgcgctggcggaggcgcggccggggctgtcgctccgggagcgcacgccggaggac
gtgttccgggcgcggtatgcgcgtgactacgaggagcctccctcggaggggttgctggag
gcgttccacacgctgctgacgcaggtgcaggaggacgcgtcatga
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