Myxococcus faecalis: VZP55_16170
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Entry
VZP55_16170 CDS
T11143
Name
(GenBank) TIGR02266 family protein
KO
K04043
molecular chaperone DnaK
Organism
mfae Myxococcus faecalis
Pathway
mfae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mfae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VZP55_16170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfae03019
]
VZP55_16170
03110 Chaperones and folding catalysts [BR:
mfae03110
]
VZP55_16170
03029 Mitochondrial biogenesis [BR:
mfae03029
]
VZP55_16170
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mfae04147
]
VZP55_16170
Messenger RNA biogenesis [BR:
mfae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
VZP55_16170
Chaperones and folding catalysts [BR:
mfae03110
]
Heat shock proteins
HSP70 / DNAK
VZP55_16170
Mitochondrial biogenesis [BR:
mfae03029
]
Mitochondrial protein import machinery
Matrix
MMC/PAM proteins
VZP55_16170
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Proteins involved in Fe-S cluster biogenesis
VZP55_16170
Exosome [BR:
mfae04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
VZP55_16170
Exosomal proteins of breast cancer cells
VZP55_16170
Exosomal proteins of colorectal cancer cells
VZP55_16170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
PilZ
Motif
Other DBs
NCBI-ProteinID:
XSF07340
LinkDB
All DBs
Position
3935533..3938931
Genome browser
AA seq
1132 aa
AA seq
DB search
MDQGRRTTDRKAVGLLVKLKHESVGSFAEEFATNLSPGGMFIRSRTPQPVGTPVKFEVQI
AGGVRVLRGTADVRWVREVGDPAGPPGMGLQFHELDPASRALVDMMLLQRKPEAPAAAVS
PLPAIAPSVAPLAPSIAPAVAPVQARPAPAPVAKPAAAPRGPALDSLFDDLDAPAAPGLD
EPFDFSPPPAAPADDVDIPLEELIASTPPPPAAPLMDEPLPGFELSLDEAPLAQGEMLDE
APIEVGLSVEDESSSSARSSGPMEFDLDMSEATGAPAPAAAKPAGGAFEFDLDFSDAVEE
APAPPPPRPSAPPPPAAAKPAEGAFEFDLDLSDAMEEAPVAPPPPRPSAPPPARPAAAKP
AGGAFEFDLDLSDAVEEAPVSPPPPPRPSAPPPAAAKPAGGALEFDLDLSDAMEEAPAAP
PPPRPVAPPPPPPPPAAAKPRSGGSLEFDLDFSDAVEELPPAAPPPTRTSPPPPPSSARP
AGGVEFDLDLSDMGGSAPPGVAAPRAPVAQARPPPPPPPAAFQPPPPAPAAPSLPNVRRE
APKAPEPVGTPTLLTPAAPKAAPVAPALDERGLPKTVFLPPPPQIAGTGPVIGIDLGTTN
SCVALLSNGRPVVLRSREGYNTIPSVISLNAQNKLLVSHRAKNQLVLRPQHTIYGAKRLV
GRPYDSAVVNQVRERFHYDIVPDAAGRAAVRLMDSVLSLEEVQAIILRECKEMAEAHLNQ
KVERAVVTVPAYYSEPQREAVRKSGILAGLKVERILNEPTSAALAYGLNRELNKRVLVYD
LGGGTFDATILKIEKNVFEVLGTGGDIFLGGIDFDNLIVDFLLKRFQEKEGLAFNGDGIA
LSRVSDAAERAKMALSERASFEVHIPMLMMDDSGRPRDLRVVMTRQELEKICDPLLSRTV
DVVRDVLLDAKLKAAEVDDIILVGGMSRMPLVRDKLKGLFGKGPQASVNADEAVALGAAL
YSGSVDKVSSVVLIDVLPMTVGIAMPGGAFKRVIERNSPLPAQRSFALSTSKDNEEVLEL
SIFQGEDNHISANEYLGTVRIEGLPRGPKGSVRVAVTIKLDSECVLHVEAREYSTRKEVK
ATLATRYSPEELQKQLQVSKESVKAAEERRGADLKERAGGFWGFVKKALGRK
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaggcaggcgcaccacggaccggaaggcagtcggtctgttggtgaagctcaag
catgaaagcgtggggagcttcgcggaggagttcgccaccaacctgagcccgggcgggatg
ttcatccgctcgcgcaccccgcagcccgtggggacacccgtcaagttcgaggtgcagatc
gccggaggcgtgcgcgtgctgcgcggcaccgccgacgtgcgctgggtccgtgaagtggga
gaccccgcggggcctcccggcatggggctccagttccacgagctggacccggccagccgc
gcgctggtggacatgatgctcctgcagcgcaagccggaggcccccgcggccgccgtctcg
ccgctgcccgccatcgccccgtccgtcgcgccgctggccccctccatcgcgccggctgtc
gcgcccgtgcaggcccggcccgcacccgcgcccgtggcgaagcccgccgcggcgcctcgt
gggcccgcgctggactcgctgttcgatgacctggacgcgccggcggctccggggctcgac
gagcccttcgacttctccccgccgcccgccgcgcccgccgatgacgtggacatcccgctc
gaggagctcatcgcgagcacgccgccgcctcccgccgcgccgctgatggacgagccactg
cccgggttcgagctgtcgctcgacgaggcgccgctcgcgcagggcgagatgctcgacgag
gcgcccatcgaggttggcctctccgtggaggacgagtcgtcctcgtcggcgcgctccagc
ggcccgatggagttcgacctcgacatgtccgaggccaccggggcccccgcgcctgccgcc
gcgaagcccgcgggtggcgcgttcgagttcgacctggacttcagtgacgcggtggaggag
gcgcccgcgccgccgcctccgcgccccagtgcgccgcctccgcccgccgccgcgaagccc
gcggaaggtgcgttcgagttcgacctggacctgagtgacgcgatggaggaggcccccgtc
gcgccgcctcctcctcgtcccagcgcgccgcctccggctcggcccgccgccgcgaagccc
gcaggtggcgcgttcgagttcgacctggacctgagcgatgcggtggaagaggccccggtc
tctccgcctccgcctcctcgtcccagcgctccgcctcccgccgccgcgaagcccgccgga
ggtgcgctcgagttcgacctggacctgagtgacgcgatggaggaggccccggccgcgccg
ccgcccccgcgccccgtcgcgccgccgcctcctcctcctcctcccgccgccgcgaagcct
cgcagtggtggcagcctggagttcgacctggacttcagtgacgcggtggaggagctgcct
cccgccgcgccgcctccgacgcgcacctcaccgccgccgcctccctcctcggctcgcccg
gcgggcggcgtcgagttcgacctggacctgtcggacatgggcggcagcgcgcctcccggc
gtggccgctccccgcgcgcccgtggcccaggcccggcctccgccgcctccgcctccggcc
gcgttccagccgcctcctcccgcgcccgcggctccgtcactgcccaacgtgcgccgcgag
gcccccaaggctcccgagccggtgggcactcccacgctgctgacgccggccgccccgaag
gccgcgcccgtcgcgcccgcgctcgacgagcggggtctgcccaagacggtcttcctcccg
ccgcctccgcagatcgcgggcacggggcccgtcatcggcatcgacctgggcaccaccaac
tcgtgcgtggcgctcctgtccaacggccgcccggtcgtgctgcgctcgcgcgagggctac
aacacgattccgtcggtcatctcgctcaacgcgcagaacaagctgctcgtcagccaccgc
gcgaagaaccagctggtgctgcgcccccagcacaccatctacggtgcgaagcgactggtg
ggccgtccctacgacagcgccgtggtgaaccaggtccgcgagcgcttccactacgacatc
gtcccggacgcggcgggccgcgccgccgtgcggctgatggacagcgtgctctcgctcgag
gaggtgcaggccatcatcctccgcgagtgcaaggagatggcggaggcccacctcaaccag
aaggtggagcgcgcggtggtgacggtgcccgcgtactactccgagccgcagcgtgaggcc
gtgcgcaagtccggcatcctcgcgggcctcaaggtggagcgcatcctcaacgagcccacc
tccgcggcgctcgcctacggcctcaaccgcgagctcaacaagcgcgtcctcgtctacgac
ctgggcggcggtaccttcgacgccaccatcctgaagatcgagaagaacgtcttcgaggtg
ctcggcaccggcggcgacatcttcctgggcggtatcgacttcgacaacctcatcgtcgac
ttcctgctcaagcgcttccaggagaaggagggcctggcgttcaacggcgacggcatcgcg
ctgtcccgcgtgagcgacgccgccgagcgcgcgaagatggccctctccgagcgcgccagc
ttcgaggtccacatcccgatgttgatgatggacgactcggggcggcctcgggatttgcgc
gtggtgatgacgcggcaggagctggagaagatctgcgacccgctgctcagccgcaccgtg
gacgtggtgcgcgacgtgctcctggacgcgaagctgaaggcggccgaggtggacgacatc
atcctcgtgggcggcatgagccgcatgccgctggtgcgcgacaagctcaagggcctgttc
ggcaaggggccgcaggcgagcgtcaacgcggacgaggccgtggcgctgggcgcggcgctg
tactcgggctcggtggacaaggtgagcagcgtggtgctcatcgacgtgctgcccatgacg
gtgggcatcgcgatgcccggtggcgccttcaagcgcgtcatcgagcgcaacagcccgctg
cccgcgcagcgctcgttcgcgctgagcacgtcgaaggacaacgaggaggtcctcgagctg
tccatcttccagggcgaggacaaccacatctccgccaacgagtacctgggcaccgtgcgc
atcgagggcctgccccgagggccgaagggctcggtgcgcgtggccgtcaccatcaagctc
gattcggagtgcgtgctgcacgtcgaggcgcgcgagtactccacgcgcaaggaagtgaag
gccacgctggccacgcgctactcgccggaggagctgcagaagcagctgcaggtgagcaag
gagtcggtgaaggccgccgaggagcgtcgtggcgcggacctgaaggagcgcgcgggcgga
ttctggggcttcgtgaagaaggcgctgggccggaagtag
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