Myxococcus faecalis: VZP55_21325
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Entry
VZP55_21325 CDS
T11143
Name
(GenBank) HU family DNA-binding protein
KO
K05788
integration host factor subunit beta
Organism
mfae Myxococcus faecalis
Brite
KEGG Orthology (KO) [BR:
mfae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mfae03032
]
VZP55_21325
03036 Chromosome and associated proteins [BR:
mfae03036
]
VZP55_21325
03400 DNA repair and recombination proteins [BR:
mfae03400
]
VZP55_21325
DNA replication proteins [BR:
mfae03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
VZP55_21325
Chromosome and associated proteins [BR:
mfae03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
VZP55_21325
DNA repair and recombination proteins [BR:
mfae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
VZP55_21325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_bac_2
HU-HIG
HTH_78
Motif
Other DBs
NCBI-ProteinID:
XSF08326
LinkDB
All DBs
Position
complement(5180288..5180638)
Genome browser
AA seq
116 aa
AA seq
DB search
MLKSDLINILVAKRGVTQKQAEATIETIFESMKDALCRGENIEIRGLGAFHVKNYQGYQG
RNPKTGQVIPVKPKRGLLFRTGKELRDRVNRPAPQQAQADLTSPESKGPGSTGTGL
NT seq
351 nt
NT seq
+upstream
nt +downstream
nt
atgctcaagtccgatctgatcaacatcctcgtggccaagcggggcgtgacgcagaagcag
gctgaggccaccatcgagacgattttcgagtcgatgaaggatgccctctgtcgcggcgag
aacatcgagattcgcggcctcggtgccttccacgtgaagaactaccagggctaccagggt
cgcaacccgaagacgggccaggtcatcccggtgaagcccaagcggggcctgctcttccgc
acgggcaaggagctgcgcgacagggtcaaccgccccgcgccccagcaggcccaggcggac
ctcacgtcccctgagagcaagggccccggcagcaccggcaccggcctctga
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