Myxococcus faecalis: VZP55_23035
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Entry
VZP55_23035 CDS
T11143
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
mfae Myxococcus faecalis
Brite
KEGG Orthology (KO) [BR:
mfae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mfae03016
]
VZP55_23035
Enzymes [BR:
mfae01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
VZP55_23035
Transfer RNA biogenesis [BR:
mfae03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
VZP55_23035
Prokaryotic type
VZP55_23035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
XSF00604
LinkDB
All DBs
Position
5604536..5605561
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AA seq
341 aa
AA seq
DB search
MTTDSDWPRLTADVPGCGGGFKLVPEDFEVEELPAYQPSGEGEHLYLWLEKRGRDTREVV
RALSQVLGVSEDDVGVAGMKDRQAVTRQLISVPARAEPKLGDFALEGVQVLWSRRHGNKL
RTGHLKGNRFRLRLRGVRDVGAARESFTRLSAGGVPNYFGEQRFGRAGDNADLGRLLVLG
QRLPKRPERFQRKLYLSAFQSRIFNRALADRVRAGTLSTALLGDVLRKEETGGLFVCEAP
EVDGPRVAAFEVSPAGPLFGPKMTASAGEVAEVEARLLAGEGVTLDDFKRGGGETEGGRR
PYRVRLGSPELTPEGEDLWLTFELPRGAYATEVLHELLKDD
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
gtgacgacggattcggattggccgcggttgacggcggatgtccccggctgtggtggtggt
ttcaagctggtccccgaggacttcgaggtcgaggagctccccgcctatcagccctcgggc
gagggcgagcacctctacctgtggctggagaagcggggccgggacacgcgcgaggtggtg
cgcgcgctgtcccaggtgctgggcgtgtccgaggacgacgtgggcgtcgcgggcatgaag
gaccggcaggccgtcacgcggcagctcatctcggtgcccgcgcgcgcggagcccaagctg
ggcgacttcgcgctggagggcgtgcaggtgctgtggtcgcggcggcacggcaacaagctg
cggaccgggcacctgaagggcaatcgcttccgcctgcgcctgcgcggcgtgcgcgacgtg
ggcgcggcgcgggagtccttcacgcggctgtccgctggcggcgtgcccaactacttcggc
gagcagcgcttcggccgcgcgggtgacaacgcggacctggggcgcctgctggtgctgggg
cagcggctgccgaagcggccggagcgcttccagcgcaagctgtacctctccgccttccag
tcgcgcatcttcaaccgggcgctcgcggaccgcgtgcgcgcgggcaccttgtccacggcc
ctgctgggggacgtgctgcgcaaggaggagaccggcggcctcttcgtgtgcgaggcaccg
gaggtggacgggccgcgcgtcgccgcgttcgaggtgagcccggcggggccgctgttcggc
ccgaagatgacggcctccgcgggcgaggtggcggaggtcgaggcgaggctgctcgcgggt
gagggcgtcacgctggacgacttcaagcgcggcggcggcgagacggagggagggcgcagg
ccgtaccgtgtccgcctgggctcgcccgagctgacgcccgaaggtgaagacctgtggctt
accttcgagttgccccggggcgcgtacgccaccgaggtactccacgagctgctcaaggac
gactga
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