Myxococcus faecalis: VZP55_24285
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Entry
VZP55_24285 CDS
T11143
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
mfae Myxococcus faecalis
Pathway
mfae00300
Lysine biosynthesis
mfae00470
D-Amino acid metabolism
mfae01100
Metabolic pathways
mfae01110
Biosynthesis of secondary metabolites
mfae01120
Microbial metabolism in diverse environments
mfae01230
Biosynthesis of amino acids
Module
mfae_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
mfae00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
VZP55_24285 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
VZP55_24285 (dapF)
Enzymes [BR:
mfae01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
VZP55_24285 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Pro_racemase
Motif
Other DBs
NCBI-ProteinID:
XSF00847
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Position
5858910..5859761
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AA seq
283 aa
AA seq
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MDARERIFKYQGLGNDFVVLDRRRSGVDIDADTSRWMCDRRLGIGADGVLSLLPSEHGLA
RMVVHNADGSIAEMCGNGLRCAVKYLVDHSGETPARIDVETGAGVLTCMPGYGDGGVVSV
DISMGPARLVAPNLPSGATGRPFLDTPLPGHPELRASAVSMGNPHLVLLDRPLEDAPRLG
PELERHPSFQDRTNVEFVRVEPDGLTVVVWERGCGLTQACGTGACASAVAAVLAGRLPPE
TWLRVTLPGGDLGIRVPADLSDIRLRGPVAFVFEGVVGLAGGR
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
gtggacgcacgcgagcgcatcttcaagtaccagggcctgggcaatgacttcgtcgtcctg
gaccgtcgccggtccggggtggacatcgacgccgacacgtcacgctggatgtgcgaccgc
cgcctgggcatcggcgcggacggtgtgctgtcgctcctgccctccgagcacggcctggct
cgcatggtcgtccacaacgccgacggcagcatcgcggagatgtgcggcaacggtctgcgc
tgcgcggtgaagtacctggtcgaccactccggggagacgcccgcgcgcatcgacgtggag
acgggcgccggagtgctcacctgcatgcccggctatggagacggcggggtggtctcagtg
gacatttccatgggcccggcacggctcgtggctcccaacctcccgtcgggcgccacgggg
cgtccgttcctggacacgccgctgccgggacaccccgagctgcgcgcgtccgcggtgagc
atgggcaacccgcacctggtcctgctcgacaggccgctggaggacgcgccgaggctgggg
cccgagctggagcggcacccctccttccaggaccgcaccaacgtggagttcgtccgcgtg
gagccggatggcctcaccgtcgtggtgtgggagcggggctgtggcctcacccaggcgtgt
ggcaccggggcgtgcgcgtccgcggtggcggcggtgctggccgggcgcctgccccccgag
acctggctgcgagtcaccctgccgggaggcgacctgggcatccgcgtgcccgccgacctg
tccgacatccgcctccggggaccggtcgccttcgtcttcgagggcgttgtcgggcttgct
gggggccggtaa
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