Myxococcus faecalis: VZP55_27360
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Entry
VZP55_27360 CDS
T11143
Name
(GenBank) AAA family ATPase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
mfae Myxococcus faecalis
Pathway
mfae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mfae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
VZP55_27360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfae03400
]
VZP55_27360
Enzymes [BR:
mfae01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
VZP55_27360
DNA repair and recombination proteins [BR:
mfae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VZP55_27360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
AAA_11
TraI_hel_assoc_N
SH3_13
CbbQ_C
Motif
Other DBs
NCBI-ProteinID:
XSF01428
LinkDB
All DBs
Position
6599899..6601179
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AA seq
426 aa
AA seq
DB search
MSRLVLRLRLQPSIPSGESPGDAPIIGGDTRSRTLVMDSSGSARLLKVPINEPVRGTPWN
HQIACALTVIKSILMASRRKNPRAYWRLAAPTNKAVQRLREVTGWRDPRDARTVHAWIGR
KAELQDDPPYGLVVDEAGFLDLEQMAELLDAARNIRRLVLVGDPDQLPSIGFGAVLRDLK
SSGKVPHVELTQVRRTEDGRGLVEAAQVILAGHVPGEAAGVRLVAPEQDGALVDAAFREY
MRLVGESGGRLVDVQALAPTRELVGRLNTLIQTQYNGRGTKVPCAPHLRVGDRVVCTETL
YGTGLVNGLQGVVTAATADGLSLRLEGAESALSVRGRGKLGIVHGGELLGSPARGRPSRL
VSPRSFPLFRSSLLADYTLIGTRPRPTRAKRTLVLVAARRHIEHAVGNVQRRKTQLADYI
VQGVSG
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
ttgagccgcctcgtgctccggctcaggctgcaaccatcgattccctcaggggaatcgcct
ggagacgcgcccatcatcggcggtgacacccggtcgcgcacgctcgtgatggattccagt
ggttccgcacgcttgctgaaggtgcccatcaacgagccggtccgtggaacgccgtggaac
catcaaatagcgtgcgcattaacagttatcaagagcatcctcatggcctcgcggcgcaag
aatcccagggcgtactggcgcctggcggctccgaccaacaaggccgtccagcgccttcgc
gaggtgacagggtggcgcgacccgcgcgacgcacggacagtgcatgcatggatcgggcgc
aaggcggaactccaggatgacccgccctatggcctcgttgtcgacgaggccggcttcctt
gatctcgagcagatggccgagctgctcgatgccgcgcggaacatccgccgtctggtgctg
gtgggcgacccggaccagctgccgagcatcggcttcggcgcggtgctgcgggacctcaag
agcagcggaaaggtgccgcacgtagagctcacgcaggtccgacgaaccgaggacggtcgc
ggcctcgtcgaggcggcgcaggtcattctggcggggcacgttccgggggaggctgccggg
gtgcggttggtggcacccgagcaggacggtgccttggtggacgcggctttccgcgaatac
atgcgcctcgtgggcgagagcggcgggcggcttgtagatgtgcaggcccttgcgcccacg
cgcgagctggtgggacggctcaacaccctcatccagacccagtacaacggtcggggcacg
aaggttccctgcgcgccgcacctgcgcgtcggcgaccgggtggtctgcaccgagacgctc
tacgggacggggctcgtcaacgggctccaaggagtggtgacggcggcaactgcggacggg
ctctcgctgcggcttgaaggggcggagagcgcgctctccgtgcgagggcgcggcaaactc
ggtatcgtccacggcggggaactcctcggctcccctgccagggggagaccgtctcggttg
gtttcaccgaggagcttccctcttttccgctcgtccctgctcgccgactacacacttata
gggacacgaccgcggcccactcgggccaagcgcacgctcgtgctggtggcggcacgccgg
cacattgagcatgcggtcgggaacgtgcagcggcgtaagacgcagctggcggactacatc
gtccagggcgtcagcggctga
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