Myxococcus faecalis: VZP55_31280
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Entry
VZP55_31280 CDS
T11143
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
mfae Myxococcus faecalis
Brite
KEGG Orthology (KO) [BR:
mfae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfae03400
]
VZP55_31280
DNA repair and recombination proteins [BR:
mfae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
VZP55_31280
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vsr
MTES_1575
DUF559
MAD2_N
Motif
Other DBs
NCBI-ProteinID:
XSF02164
LinkDB
All DBs
Position
complement(7621593..7622141)
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AA seq
182 aa
AA seq
DB search
MGLSRSEQMSRIRGRDTSPERLLRSALWRAGLRFRLHVRTPHGRPDVVFPGHKVAVFIDG
CFWHGCPEHYVRPRTRDEFWSSKLRENVDRDRRQTILLEEDGWRVCRVWEHQLFESLADV
VECVRQALQDGEWTASASWRVVQVIPQAGEDDMEQRLMEDLRDATTSRSVFGRRSTKKWK
RT
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgggcctctcccgttccgaacagatgtcgcggatccgcggccgagacacctctcctgag
cgcctgctccgttcagcgctctggcgggccggactgcgcttccgcctgcacgtgcgaacg
ccccatgggaggcccgatgtggtcttcccagggcacaaggtcgccgtcttcattgatggc
tgtttctggcatggatgccccgagcactacgttcgcccgcgaacgcgggacgagttctgg
tcctcaaaactgcgcgagaacgtcgatcgggaccgccggcagacgattctccttgaagaa
gatggttggcgcgtctgccgcgtctgggagcaccagctcttcgagtcccttgcggatgtc
gtcgagtgcgtccgccaagcactccaggacggagagtggactgcctccgcatcatggcgg
gtcgtccaggtcattccacaggccggagaggacgatatggagcagcgcttgatggaagac
cttcgagatgccaccacgtcgcgctccgtgttcggacgacgaagcacgaagaagtggaag
aggacatga
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