Myxococcus faecalis: VZP55_33005
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Entry
VZP55_33005 CDS
T11143
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
mfae Myxococcus faecalis
Brite
KEGG Orthology (KO) [BR:
mfae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mfae03016
]
VZP55_33005 (truD)
Enzymes [BR:
mfae01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
VZP55_33005 (truD)
Transfer RNA biogenesis [BR:
mfae03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
VZP55_33005 (truD)
Prokaryotic type
VZP55_33005 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
XSF02494
LinkDB
All DBs
Position
8121719..8123401
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AA seq
560 aa
AA seq
DB search
MRIKQKPEDFSVKESYRFDEVASGRFRVYLMDKQKLSTFDAVARLRDAFGLKPGSISYCG
LKDKQGRTEQLIAVDGADVDMQEPDLRLKYLGRTNKALSSANITSNRFSVTVRALEESSL
GPLNVAAAEVNRLGVINYFDSQRFGSLKHGQGFIAKDLIRGDFEAALHNYLAKPSELDRS
EDAKVKAFWRDNWGHWDARVPFEGTKKYHRVLRALREEPKDFTRAFLQIDADYRAMQLFT
YQSYLWNEGVRRYLQLLLPRESLFPMRYQAGSLLFHKDADPETLRVLRDATFPLLAPDST
FTDPKIEDAVRWVLGREKLKLSDLVIPGAERMLFFKHEERPVLSFPHKLVIGRTQADELN
RGNIKVNVAFTLPPGAYATLVVKRLFHFEYAEDTAEEIRASQRAHLVEQEQAEGAPSSRR
GPPVRDERGTSRRAPAARGATGRRAETSFDEERPRASDRRAPTRGEAPTRRGATEVEAPR
RPGRRGTADLEAPSRPGRRGAAEDSETPTRGRSLAQQAEPKPRQEPAAPLGFREKQRQRK
AAREVARAETEAKRSKSRKK
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
gtgcgaatcaaacagaagcccgaagacttcagcgtcaaggaatcctaccgcttcgatgaa
gtcgcctccgggcgtttccgcgtctacctgatggacaagcagaagctgtccacgttcgac
gccgtggcacgcctgcgggacgcgttcggtctcaagccgggctccatcagctattgcggc
ctgaaggacaagcagggccgcaccgagcagctcatcgccgtggacggcgccgacgtggac
atgcaggagccggacctccgcctgaagtacctgggccggacgaacaaggccctgtcctcg
gcgaacatcacgtccaaccgcttctccgtgacggtgcgcgccctggaggagtcgtccctg
ggccccctcaacgtggcggccgccgaggtgaaccgcctgggcgtcatcaactacttcgac
agccagcgcttcggctcgctcaagcacgggcagggcttcatcgccaaggacctcatccgg
ggcgacttcgaggcggcgctgcacaactacctggccaagccgtcggagctggaccgctcc
gaggacgccaaggtgaaggccttctggcgcgacaactggggccactgggacgcgcgcgtc
cccttcgagggcaccaagaagtaccaccgcgtcctgcgcgcgctgcgcgaggagcccaag
gacttcacccgcgccttcctgcagatcgacgcggactaccgcgcgatgcagctgttcacc
taccagagctacctctggaacgagggcgtgcggcgctacctgcaactgctgttgccgcgc
gagtcgctgttccccatgcgctaccaggccggctcgctcctgttccacaaggacgcggac
ccggagacgctgcgcgtgctgcgcgacgccaccttccccctgctcgcgcccgacagcacc
ttcacggatccgaagatcgaggacgccgtgcgctgggtgctcggccgcgagaagctgaag
ctgtcggacctggtcatccccggggccgagcgcatgctcttcttcaagcacgaggagcgc
ccggtcctctccttcccgcacaagctggtcatcggccgcacgcaggccgacgagctcaac
cggggcaacatcaaggtcaacgtcgccttcacgctgccgccgggcgcgtacgccaccctc
gtcgtcaagcgcctgttccacttcgagtacgccgaggacaccgcggaggagatccgcgcc
tcccagcgcgcgcacctcgtcgagcaggagcaggccgagggtgccccctccagccgccgc
ggccctcccgtccgcgacgagcggggcaccagccgccgggcccccgccgcccgtggcgcc
acgggccgccgcgccgagacctccttcgacgaggagcgtccccgcgcctcggaccgtcgg
gcgcccacgcgaggcgaggcccccacccggcgcggcgccaccgaggtcgaggccccccgc
cgtcccggccggcgaggcacggctgacctcgaggcccccagccgtcccggccggcgcggc
gccgccgaggactccgagacgcccacccggggccgctcgctcgcccagcaggcggagccc
aagcccaggcaggagcccgccgccccgctcggcttccgtgaaaaacagcgccagcgcaag
gccgcccgcgaggtcgcccgggcggagaccgaagccaagcgctcgaaatcacgaaagaaa
taa
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