KEGG   Myxococcus faecalis: VZP55_36785
Entry
VZP55_36785       CDS       T11143                                 
Name
(GenBank) HD domain-containing protein
  KO
K03698  3'-5' exoribonuclease [EC:3.1.-.-]
Organism
mfae  Myxococcus faecalis
Brite
KEGG Orthology (KO) [BR:mfae00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mfae03019]
    VZP55_36785
Messenger RNA biogenesis [BR:mfae03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     VZP55_36785
SSDB
Motif
Pfam: HD tRNA_anti-codon TraI_2
Other DBs
NCBI-ProteinID: XSF03210
LinkDB
Position
9125728..9127227
AA seq 499 aa
MTNENAPQTATSTPADSVETVRKVYAADLREKDRVHTVFRVTKKEKVTARSGKVFLALTL
VDKSGEVDARVFDKVDALEPSFQSGDFVLVQGNVIQFHGRTQVVVEGLERLDPEPLDPKE
FEPPPAPPAEAKAAPEAKPAAEPRAEKADKGEKSEPRHDGGGGARAAGLIRELINERIND
PFVKQLLIAFLDDPQVSAGLPVAPAAKGMHHAWRGGLAEHLLSVMRLTLRVADHYPMADR
DLLLAGAFLHDVMKVAEISPDKGFDYTDEGKLVGHLVMTAQKIREKTLSIPGFPPLLENH
LTHLAISHHGQLEYGSPKVPMTIEAHIVHALDSLDSRIASWLEAMQRDSNEKWTDVLRHY
DRQLWKGPLPTVRGRGPVEGGGGGRRKSREEKRKNRGDKAPQQQAPSQEGGAPVVAREEQ
QPQQRPPRRERPPREDRPPREDRPPREERARDEQRAPREERPPRPPRDPNSLPKELTFKP
FSALTTLSGDKSGEGSSES
NT seq 1500 nt   +upstreamnt  +downstreamnt
atgaccaacgaaaacgccccccagaccgcgacctccaccccggcggattccgtcgagacc
gtccgcaaggtgtacgcggccgacctgcgtgagaaggaccgcgtccacaccgtcttccgc
gtcaccaagaaggagaaggtgacggcccgcagcggcaaggtgttcctggccctgacgctc
gtcgacaagagcggcgaggtggacgcgcgcgtgttcgacaaggtcgacgcgctcgagccg
tccttccagtccggcgacttcgtgctcgtccagggcaacgtcatccagttccacggccgc
acgcaggtggtggtggagggcctggagcgcctggaccccgagcccctggaccccaaggag
ttcgagccgcccccggcgcctcccgccgaggccaaggccgccccggaggcgaagcccgcc
gccgagccccgcgccgagaaggccgacaagggtgagaagagcgagccccgtcacgacggc
ggcggtggcgcccgggccgcgggcctcatccgcgagctcatcaacgagcgcatcaacgat
ccgttcgtgaagcagctcctgattgcgttcctggacgacccgcaggtgtcggcggggctg
ccggtggcgccggccgccaagggcatgcaccacgcgtggcgagggggcctggccgagcac
ctgctgtcggtgatgcggctgaccctgcgggtggcggaccactaccccatggcggaccgg
gacctgctgctggcgggtgcgttcctgcacgacgtgatgaaggtggcggagatctccccg
gacaagggcttcgactacaccgacgagggcaagctcgtgggccacctggtgatgacggcc
cagaagatccgcgagaagacgctgtccatcccgggcttcccgccgctgctcgagaaccac
ctcacgcacctggccatctcgcaccacgggcagctggagtacggcagccccaaggtgccg
atgaccatcgaggcgcacatcgtccacgcgctcgactcgctcgactcgcgcatcgcctcg
tggctagaggccatgcagcgcgactcgaacgagaagtggacggacgtgctgcgccactac
gaccggcagctctggaagggccccctgcccaccgtgcgcggccgcgggcccgtcgagggt
ggcggtggtggccggcgcaagtcgcgcgaggagaagcgcaagaaccggggcgacaaggct
ccgcagcagcaggccccttcgcaggagggcggcgcgccggtggtggcgcgtgaggagcag
cagccgcagcagcgtcctccccgccgcgagcggccgcctcgcgaggaccgtcctccccgc
gaggaccgtccgccgcgcgaggagcgcgcccgggacgagcagcgcgcgccccgagaggag
cgtccgccgcgtccgccgagggatccgaacagcctgccgaaggagctgacgttcaagccc
ttcagcgcgctgacgacgctctcgggcgacaagagtggcgagggttcgtcggaaagctga

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