Myxococcus faecalis: VZP55_37840
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Entry
VZP55_37840 CDS
T11143
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
mfae Myxococcus faecalis
Pathway
mfae03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mfae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
VZP55_37840 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfae03400
]
VZP55_37840 (uvrB)
DNA repair and recombination proteins [BR:
mfae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
VZP55_37840 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
VZP55_37840 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
SWI2_SNF2
UB2H
AAA_22
DUF87
KOW6_SPT5
Kinesin
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
XSF03412
LinkDB
All DBs
Position
complement(9378471..9380573)
Genome browser
AA seq
700 aa
AA seq
DB search
MPEFQIVSDHQPEGDQPRAIGELTEGVQRGDRYQTLLGVTGSGKTFTMANIIANVQRPTL
VIAHNKTLAAQLYGEFKSLFPNNAVEYFVSYYDYYQPEAYVPSTDTFIEKDSSINDNIER
MRHSATHSLRTRDDVVIVASVSCIYGLGTARSYVDLAVRVDQGGEMERDAFMRRLVEAQY
ERNDMDFHRGTFRARGDTVEVFPAYEEERAIRVSFFGDEVERITEFDPLRGVTLGALDKI
VIFPASHYVAGEDSRRRAIQTIRDELAEQLGTFKREGKLLEAQRLEQRTMFDLEMIEQVG
YCNGIENYSRHFSGRAPGEPPPCLIDYFPRNLLVLIDESHQTVPQIGAMYRGDRARKETL
VNFGFRMPSALDNRPLKFGEFEELVPQAVFVSATPSEYELQKSQGVVVEQIIRPTGLTDP
EVETRPVGNQVDDLLEEVRVRVSRNERVLVTTLTKRMAEDLTEYYADVGVRVRYLHSDID
AIERTAIIRDLRKGEFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSHVSLIQTIGR
AARNLNGRVIMYADSVTDSMKKALEETSRRREIQRQYNKEHGITPRSVKSNITDLSEHLY
DAESAGALPMAAEGEDDVLESKELKRLIEEFTQDMHRAAESMEFEKAAEYRDKVQLLKDM
DLGLKPASRSLLKGPAKAKEDDAPKKGRGRGRSSRAKPRR
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagttccagatcgtcagcgaccaccagcccgagggcgaccagccgagggccatt
ggcgagctcacggagggcgtgcagcggggcgaccgctaccagacgctcctgggcgtcacc
ggttccggcaagacgttcaccatggcgaacatcatcgccaacgtgcagcggcccacgctg
gtcatcgcgcacaacaagacgctggccgcccagctctacggcgagttcaagtcgctcttc
ccgaacaacgccgtcgagtacttcgtctcgtactacgactactaccagcccgaggcctac
gtcccgtcgacggacaccttcatcgagaaggactcgtccatcaacgacaacatcgagcgc
atgcgccactcggccacgcactcgctgcgcacgcgcgacgacgtggtgattgtcgccagc
gtctcctgcatctacggcctgggcacggcgcgcagctacgtggacctggcggtgcgcgtg
gaccagggcggggagatggagcgcgacgcgttcatgcgccggctcgtcgaggcgcagtac
gagcgcaacgacatggacttccaccgcggcaccttccgcgcgcgcggcgacaccgtggag
gtgttccccgcctacgaggaggagcgcgccatccgcgtgagcttcttcggcgacgaggtg
gagcgcatcaccgagttcgacccgctgcgcggcgtgacgctcggcgcgctggacaagatc
gtcatcttccccgccagccactacgtcgccggcgaggactcgcgcaggcgcgccatccag
accatccgcgacgagctggccgaacagctcggcaccttcaagcgcgagggcaagctcctg
gaggcgcagcggctggagcagcgcaccatgttcgacctggagatgatcgaacaggtcggc
tactgcaacggcatcgagaactactcacggcacttctcggggcgggccccgggcgagccg
ccgccgtgcctcatcgactacttcccgcgcaacctgttggtgctcatcgacgagagccac
cagacggtgccgcagattggcgccatgtaccggggagaccgcgcgcgcaaggagacgctg
gtcaacttcggcttccgcatgcccagcgcgctggacaaccggccgctgaagttcggcgag
ttcgaggagctggtgccgcaggccgtcttcgtctcggcgaccccgtccgagtacgagctg
cagaagtcccagggtgtcgtggtggagcagatcatccgccccacgggcctgacggacccg
gaggtggagacgcggccggtcggcaaccaggtcgatgacctcctcgaggaggtgcgcgtc
cgcgtcagccgcaacgagcgcgtcctggtgacgacgctcaccaagcgcatggccgaggac
cttaccgagtactacgcggacgtgggcgtgcgcgtgcgctacctgcactcggacatcgac
gcgattgaacgcacggccatcatccgcgacctgcgcaagggcgagttcgacgtgctggtg
ggcatcaacctcctgcgcgagggcctggacatccccgaggtgtcgctggtggccatcctc
gacgcggacaaggagggcttcctgcgcagccacgtgtcgctcatccagaccatcggccgc
gcggcgcgcaacctgaatggccgcgtcatcatgtacgcggactccgtcaccgactcgatg
aagaaggcgctggaggagacctcccgtcgcagggagatccaacgccagtacaacaaggag
cacggcatcaccccgcgctccgtcaagagcaacatcacggacctgtccgagcacctctac
gacgccgagtccgcgggcgcgctgcccatggcggccgagggcgaggacgacgtgctcgag
tcgaaggagctcaagcgcctcatcgaggagttcacccaggacatgcaccgggccgccgag
tcgatggagttcgagaaggccgccgagtaccgggacaaggtgcagctgctcaaggacatg
gacctgggcctcaagcccgcgtcgcgctcgctgctcaagggcccggcgaaggccaaggag
gacgacgcgccgaagaagggccggggccggggtcgttcgtcacgggcgaagccgcgccgc
tag
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integrated database retrieval system
