Myxococcus faecalis: VZP55_38355
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Entry
VZP55_38355 CDS
T11143
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
mfae Myxococcus faecalis
Pathway
mfae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mfae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VZP55_38355 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfae03019
]
VZP55_38355 (pcnB)
Enzymes [BR:
mfae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
VZP55_38355 (pcnB)
Messenger RNA biogenesis [BR:
mfae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
VZP55_38355 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
PolyA_pol_arg_C
Motif
Other DBs
NCBI-ProteinID:
XSF03513
LinkDB
All DBs
Position
complement(9511696..9513408)
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AA seq
570 aa
AA seq
DB search
MSSNLELTAAPSEQATAPENEATASAPSEVESPSPLLAQSAPTARAPEPPSEDEADDDED
DDDEADALDDTGLGAVEEVLAAAEAQDAAEAAADEEVEQVPTVLEPEPEPTPYERELHAP
HVRSTGEPAEIDPDELDPDALKVVLRLHQHGHQAYLVGGCVRDLLLGRKPKDFDVATSAH
PNEVRAIFRNCRLIGRRFRLAHVYFKGGKIIEVSTFRANPTELEAASPAAAEDEGDNGGD
DLLITHDNVFGTAQQDARRRDFTINGLFYDVSEGRVIDYVRGRRDLDERFIRTIGDPEVR
MREDPVRILRAVRFAAKLDLDIESRTYAAMEGAVEDLPRCAPARLLEETFRLIRGGVSAP
ALKLLDALDALKLLLPPVNAYLKQHGKEGEKTFYAFAQALDRRVAAGEPLDDAILLAALL
VPISHSGPPAEPQDGGRPSVSQVVEELLAGFVQSARLPRRIAERCRMLLLAQRTLSGERR
RKSAAFRRHPLFGEALTVFEMSVEATGEGREQLEAWKAGEVPPPRAESSEGEGGSEPGGQ
RKRRRRRRRRRSSGEGAASAGSSGSGAGEA
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccaatctggagctgacggcggccccctcggaacaggcgaccgcccccgagaac
gaggccactgcttcagccccttccgaggtcgagtccccatcccccctgctggcccagtcg
gcccccaccgcccgcgcgccggagcccccgtcggaggacgaggcggacgacgacgaggat
gacgacgacgaggcggacgcgctcgacgacacgggcctgggcgccgtcgaggaggtgctc
gccgccgccgaggcgcaggacgcggccgaggccgccgccgacgaagaggtggagcaggtg
cccaccgtgctcgagcccgagcccgagccgactccctacgagcgcgagctgcacgcgccc
cacgtgcgctccaccggcgagccggcggagatcgacccggacgagctggacccggacgcg
ctcaaggtggtgctgcggctgcatcagcacgggcaccaggcgtacctggtgggcggctgc
gtgcgcgacctgctcctgggccgcaagcccaaggacttcgacgtggccaccagcgcgcac
ccgaacgaggtgcgcgccatcttccgcaactgccggctcatcggccgtcgcttccggctg
gcgcacgtctacttcaagggggggaagatcatcgaggtctccaccttccgcgccaacccc
acggagctggaggccgcctcgccggccgcggcggaggacgagggcgacaacggcggggat
gacctgctcatcacccacgacaacgtcttcggcaccgcgcagcaggacgcgcgccgccgc
gacttcaccatcaacggcctgttctacgacgtgagcgaggggcgggtcatcgactacgtc
cgcggccggcgtgatttggacgagcgcttcatccgcaccatcggcgaccccgaggtgcgc
atgcgcgaggacccggtgcgaatcctgcgcgccgtgcgcttcgcggcgaagctggacctg
gacatcgagtcgcgcacgtacgcggcgatggagggcgcggtggaggacctgccgcgctgc
gcgcccgcgcgcctgttggaggagaccttccgcctcatccgcggcggggtgtccgcgccc
gcgctcaagctgctggacgcgctcgacgcgctgaagctgctgttgccgcccgtcaacgcg
tacctcaagcagcacggcaaggagggcgagaagaccttctacgccttcgcccaggcgctg
gaccgccgggtggccgcgggcgagccgctcgacgacgccatcctcctggcggcgctgctg
gtgcccatcagccactccgggcctccggccgagccgcaggatgggggccgcccgtcggtg
tcgcaggtggtggaggagctgctcgcgggcttcgtgcagtcggcccggctgccgcgccgc
atcgccgagcgctgccgcatgctgctgctcgcccagcgcacgctgtcgggggagcgccgt
cgcaagagcgcggccttccgtcggcacccgctgttcggcgaggcgctcaccgtgttcgag
atgtcggtggaggccaccggcgagggccgtgagcagctggaggcgtggaaggccggcgag
gtgccgccgccgcgcgccgagtcctcggagggcgagggtggctcggagcccggtggtcag
cgcaagcgccgccgccgtcgtcgtcgccgtcgttcctccggtgaaggggccgcctcggcg
ggttcttccggctcgggcgccggcgaggcgtga
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