Myxococcus faecalis: VZP55_38680
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Entry
VZP55_38680 CDS
T11143
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mfae Myxococcus faecalis
Pathway
mfae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mfae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VZP55_38680 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mfae03021
]
VZP55_38680 (rho)
03019 Messenger RNA biogenesis [BR:
mfae03019
]
VZP55_38680 (rho)
Transcription machinery [BR:
mfae03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
VZP55_38680 (rho)
Messenger RNA biogenesis [BR:
mfae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
VZP55_38680 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
AAA_25
Rho_RNA_bind
AAA_22
NACHT
ResIII
TFIIA
AAA
AAA_24
Motif
Other DBs
NCBI-ProteinID:
XSF03575
LinkDB
All DBs
Position
9592243..9593802
Genome browser
AA seq
519 aa
AA seq
DB search
MSENSDNRDPRDATPPPAAARPVPPPEADDDGDEGDDEGGDEGEGGGASASGGQPGQPGQ
PGGRRRRRRRRRRGAQVLFTPEGQAYRMTAGPDGQQVQVFLTPQELEQYKQRQAQQQQQG
QQQPQQQQQHQGHGGGQQHQRQHHGGQGQAQQQSNLAPVEGVLDTEVKGPNAFLRQLKRN
LLAAPDDPELPKNLVQKLRLRQGQYLTAFAQMRGHKGIIQKVDTVDGRPLEGVPRLPHFA
DLTSVDPTERLKLENGHKEMVTRVLDLISPIGKGQRALIVAPPKTGKTIMLQRIAQAVIS
NHPEAHVMVVLIDERPEEVTDMRRSIKAEVLASSSDRPTGDHLKVAELALERARRLVETG
KDVVILLDSITRLARAFNKEVDNSGRTMSGGVDSRALERPKRIFGAARATEEAGSLTIIG
TALIDTGSRMDEVIFEEFKGTGNSEVTLDRLLAEKRVFPAVNIAQSGTRKEEKLFTQREY
EKVKKLRQMLFAVKPVEAMEALVKRLSRYTYNDEFLDEL
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaaactccgataaccgcgacccccgtgatgccaccccgccgcccgcggctgcc
cgtcccgtccctcctcccgaggcggatgacgacggcgacgaaggcgacgacgagggtggc
gacgagggcgaaggcggaggcgcctccgcgtcgggcggccagcccggccagcccggtcag
cccgggggacgccgccgccgtcggcgccgtcggcgtcgtggcgcgcaggtgctcttcaca
ccggagggtcaggcgtaccgcatgacggcgggcccggacggccagcaggtccaggtcttc
ctgacgccgcaggagctggagcagtacaagcagcgccaggcgcagcagcaacagcagggc
cagcagcagccccagcaacagcagcagcatcagggccacggcggcggccagcagcatcag
cgccagcaccacggcggccagggccaggcgcagcagcagtccaacctggcgccggtggag
ggcgtgctggacacggaggtcaagggccccaacgcgttcctgcgccagctcaagcgcaac
ctgctggcggcgccggacgacccggagctgcccaagaacctggtgcagaagctgcggctg
cgtcagggccagtacctgacggcgttcgcgcagatgcgcggccacaagggcatcatccag
aaggtcgacaccgtggatggccgtccgctggagggcgtgccccggctgccgcacttcgcg
gacctgacgtcggtggaccccaccgagcggctcaagctggagaacggtcacaaggagatg
gtgacccgggtgctggacctcatctcgcccatcggcaaggggcagcgcgcgctcatcgtc
gcgcccccgaagacgggcaagaccatcatgctccagcgcatcgcccaggcggtcatctcc
aaccacccggaggcgcacgtcatggtggtgctcatcgacgagcggcccgaggaagtgacg
gacatgcgccgcagcatcaaggcggaggtgctcgcgtccagctcggaccggcccaccggg
gaccacctcaaggtggcggagctggcgctggagcgcgcccggcgcctggtggagacgggc
aaggacgtggtcatcctgctggactcgattacacggctggcgcgcgccttcaacaaggag
gtcgacaactccggccgcaccatgtccggcggcgtggacagccgcgcgctggagcgcccc
aagcgcatcttcggcgccgcgcgggcgaccgaggaggcgggctcgctcaccatcatcggc
acggcgctcatcgacaccggcagccgcatggacgaggtcatcttcgaggagttcaagggc
acgggtaactccgaggtcaccctggaccgcctgctcgccgagaagcgcgtcttccccgcg
gtcaacatcgcccagtccggcacgcgcaaggaggagaagctcttcacccagcgcgagtac
gagaaggtgaagaagctgcggcagatgctcttcgcggtgaagcccgtggaggcgatggag
gccctggtgaagcggctgtcgcgctacacctacaacgacgagttcctcgacgagctctga
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