Myxococcus faecalis: VZP55_41170
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Entry
VZP55_41170 CDS
T11143
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mfae Myxococcus faecalis
Pathway
mfae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mfae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VZP55_41170 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfae03019
]
VZP55_41170 (pnp)
03016 Transfer RNA biogenesis [BR:
mfae03016
]
VZP55_41170 (pnp)
Enzymes [BR:
mfae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
VZP55_41170 (pnp)
Messenger RNA biogenesis [BR:
mfae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
VZP55_41170 (pnp)
Transfer RNA biogenesis [BR:
mfae03016
]
Prokaryotic type
tRNA degradation factors
VZP55_41170 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
KH_1
PNPase
S1_RRP5
KH-I_KHDC4-BBP
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
XSF04051
LinkDB
All DBs
Position
complement(10280863..10283031)
Genome browser
AA seq
722 aa
AA seq
DB search
MLKKSVKIGESELSIETGRLAKQADGSVVVRYGDTMLLVTAVSAREKKDIDFLPLTVEYQ
EKLYSAGRIPGSYFKREGRLTEKETLASRLVDRSMRPLFPEGYAYETQIIASVISADPEN
EGDVHGITGASAALWVSDIPFDGPLAGIRVGRVGGQLVANPTAKQREQSDLDLVMAVSRK
AIVMVEGGAEEVSEPDMVAALEFGFQSAQPALDLQDELRRALNKQVRSFDKPASVDEALR
GKVRELSMDGIKAGYAIKEKGARYEALSKTKKETLARLKEQMAEAYTPLVEKHAKQVVED
LKYEHMREMTVNGGRIGDRGHDVVRSITCEVGVLPRTHGSAVFTRGETQALVVATLGTSE
DEQRLEMLGGMSFKRFMLHYNFPPFSVNETKPLRGPGRREIGHGALAERALRNMVPKSES
FPYTVRLVSDILESNGSSSMASVCGGTLALMDAGVPIKSPVAGIAMGLVKEGEKIAILSD
ILGDEDHLGDMDFKVCGTTKGITSIQMDIKITGLTTEIMSRALEQARQGRLHILDEMLKT
LAQPRKEISQYAPRITTIQIRPEFIKNVIGPGGKVIKDIIARTGAAINIEDSGRVDIASA
NGEAVKAAIAMIQALTREAEIGKIYTGTVRKIAEFGAFVELFPGTDGLIHISELSDKRVK
SVSDVLKEGDEVLVKVVSIDKTGKIRLSRKEAMAERAAAQQGAADAVAAQPSPEATQPNA
KA
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagaagagcgtcaagattggcgagagcgagctgagcatcgagacgggccgtctg
gccaagcaggccgatggctccgtggtggtccgctatggcgacaccatgctgctcgtgacg
gcggtgagcgcgcgggagaagaaggacatcgacttcctgccgctgacggtggagtaccag
gagaagctgtactcggcgggtcgcatccccggcagctacttcaagcgcgagggccggctg
acggagaaggagacgctggccagccgcctggtggaccgctccatgcgtccgctgttcccg
gaaggctacgcgtacgagacgcagatcatcgccagcgtcatctccgcggacccggagaac
gagggtgacgtgcacggcatcaccggcgcctccgcggcgctgtgggtgtccgacatcccg
ttcgacggccccctcgcgggcatccgcgtgggccgcgtgggcggtcagctggtggccaac
cccaccgcgaagcagcgtgagcagagcgacctggacctggtcatggcggtcagccgcaag
gccatcgtcatggtggagggtggcgcggaggaggtgtccgagcccgacatggtcgccgcg
ctggagttcggcttccagtccgcccagcccgcgttggacctgcaggacgagttgcgccgc
gcgctgaacaagcaggtgcgctcgttcgacaagccggcctccgtggacgaggccctgcgc
ggcaaggtgcgcgagctgtcgatggacggcatcaaggccggctacgccatcaaggagaag
ggcgcgcgctacgaggcgctctccaagacgaagaaggagacgctcgccaggctcaaggag
cagatggcggaggcctacacgccgctggtggagaagcacgccaagcaggtggtggaagac
ctcaagtacgagcacatgcgcgagatgacggtcaacggtggccgcatcggcgaccgtggc
cacgacgtggtccgctccatcacgtgtgaggtgggcgtgctcccgcgcacccacggcagc
gcggtgttcacccgtggcgagacgcaggcgctcgtggtggcgacgctgggcaccagcgag
gacgagcagcgcctggagatgctcggaggcatgtccttcaagcgcttcatgctgcactac
aacttccccccgttcagcgtgaacgagaccaagccgctgcgcggcccgggccgtcgtgaa
atcggccacggcgcgctggcggagcgcgcgctgcgcaacatggtgcccaagagcgagtcg
ttcccgtacacggtgcgcctcgtctccgacatcctcgagtccaacggctcctcctccatg
gcctccgtgtgcggtggcacgctggcgctgatggacgcgggcgtccccatcaagtcgccg
gtggccggcatcgccatgggcctggtgaaggagggcgagaagatcgccatcctgtccgac
atcctcggtgacgaggaccacctgggcgacatggacttcaaggtgtgcggcaccaccaag
ggcatcacctccatccagatggacatcaagatcaccggtctcaccacggagatcatgagc
cgcgcgctggagcaggcgcgtcagggccgtctccacatcctggatgagatgctcaagacg
ctggcgcagccgcgcaaggagatcagccagtacgctcctcgcatcacgaccatccagatt
cgtcccgagttcatcaagaacgtcatcgggccgggtggcaaggtcatcaaggacatcatc
gcgcgcaccggcgcggcgattaacatcgaggactccggtcgggtggacatcgccagcgcg
aacggcgaggccgtgaaggccgccatcgcgatgatccaggcgctgacccgcgaggcggag
atcgggaagatctacacgggcacggtgcggaagatcgccgagttcggcgccttcgtggag
ctgttcccgggcaccgacggcctcatccacatctccgagctgtccgacaagcgcgtcaag
agcgtctccgacgtgctgaaggagggcgacgaggtgctggtgaaggtcgtcagcatcgac
aagacgggcaagatccgcctgtcgcgcaaggaggcgatggcggagcgcgcggcggcccag
cagggcgcggccgacgcggtcgccgcccagccgtctcccgaggccacgcagcccaacgcc
aaggcgtga
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