Myxococcus faecalis: VZP55_41180
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Entry
VZP55_41180 CDS
T11143
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mfae Myxococcus faecalis
Brite
KEGG Orthology (KO) [BR:
mfae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mfae03016
]
VZP55_41180 (truB)
Enzymes [BR:
mfae01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
VZP55_41180 (truB)
Transfer RNA biogenesis [BR:
mfae03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
VZP55_41180 (truB)
Prokaryotic type
VZP55_41180 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
TruB-C_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
XSF04052
LinkDB
All DBs
Position
complement(10283887..10284759)
Genome browser
AA seq
290 aa
AA seq
DB search
MDGVLVIDKPTGPTSFDVVRQVRSLLKLKKVGHTGTLDPMATGVLPLCLGEATKVAGFIT
EGDKAYDATVRLGAETDTQDAEGQVTARAPVPALTPALLEAALARFRGPFEQVPPMYSAV
KVAGKRLYELARAGEEVERAARQVTVYELVLRDFSADRLHLSVRCSKGFFVRTLAFDLGR
ALGCGAHLEALRRTSSGPFTLARALPLTDVASLAKEGLLAPRLVSLSDALVDMPEVRVNA
DEARRVSHGVPVEVPASLKPGRVRVMGPDGALLAVAEGVGGRLRYLRVLV
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggacggcgtcctcgtcatcgacaagcccaccggccccacgtccttcgacgtggtgcga
caggtgcgctcgctgctcaagctgaagaaggtgggccacacggggaccttggaccccatg
gccaccggggtgcttcccctgtgtctgggggaggccaccaaggtggcgggcttcatcacc
gagggcgacaaggcctacgacgccacggtgcgcctgggcgcggagacggacacccaggac
gcggaagggcaggtgacggcccgggcgccggtgccggcgctgacgcccgcgctgctggag
gccgcgctcgcgcgcttccgggggcccttcgagcaggtgccgcccatgtattcggcggtg
aaggtggccggcaagcgcctgtatgaactggcccgcgcgggcgaagaggtggagcgcgcc
gcccgccaggtgacggtgtacgagctggtgctgcgcgacttctccgcggaccggctccac
ctgtccgtgcgctgctccaagggcttcttcgtgcgcaccctggcgttcgacctgggccgc
gcgctgggctgcggggcgcacctggaagcgctgcgtcgcacctccagcgggcccttcacg
ctggcgcgggcgctgcccctgacggacgtggcgtccctggcgaaggagggcctcctggcc
ccgcggctggtgtcgctctccgacgcgctggtggacatgcccgaggtgcgggtgaacgcg
gacgaggcgcgccgcgtctcccacggtgtcccggtggaggtccccgcctcgctcaagccc
ggccgcgtgcgggtgatggggccggacggcgcgctgctcgccgtggccgagggcgtgggc
gggcggctgcgctacctgcgggtgctcgtctag
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