Myxococcus fulvus: MFUL124B02_05950
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Entry
MFUL124B02_05950 CDS
T06896
Name
(GenBank) hypothetical protein
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
mfb
Myxococcus fulvus
Pathway
mfb03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mfb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
MFUL124B02_05950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfb03400
]
MFUL124B02_05950
Enzymes [BR:
mfb01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
MFUL124B02_05950
DNA repair and recombination proteins [BR:
mfb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
MFUL124B02_05950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
LigD_N
DNA_ligase_A_M
DNA_ligase_A_C
DNA_primase_S
mRNA_cap_enzyme
DNA_ligase_OB_2
Motif
Other DBs
NCBI-ProteinID:
AKF84904
LinkDB
All DBs
Position
complement(1433916..1436651)
Genome browser
AA seq
911 aa
AA seq
DB search
MNRARTRLQTYRRKRDFRRTPEPAPEAPASSDGAPVFVVHKHDATSLHYDLRLEIDGALA
SWAVPKGPSYDPGDKRLAVETEDHPLAYADFEGHIPDDAYGGGDSLLWDRGTFDTVPPGQ
AHAQREHGRLHVELRGEKLRGRWHLIRTRLRGSAKKPQWLLFKAKDETADPSLDITTERP
ESVKSGQVETRGPVKRGARKRPASRAREVAAKPSTKKRKPHALETPRTPAKLLERLGAPM
LARLAVPEEVTDATHVYEVKYDGFRALAALVGGKLALRSRRGNDLSKRFPALAEALSELG
VKDVVLDGEIVALDAKGRSRFQLLQQGLEGVEQRFVVFDIPWLDGEDLRSLPLEERRARL
ERVMKRVKLPLQLSERIELPMKRALDQARRKGWEGLIAKRRGSTYVDTRSGDWLKLKVVA
GQEVVILGYLPIQNERSETELGALLVGVHREDGFHDVGKVGTGFTSKDRRELRALLDEDV
VREPAAVDAKPRKGAVWVKPRHVAQVNFSEWTEDGRLRQPVYQGLRIDKAPTEVVRERPA
PVAREHGTSRQPARTSTASIDSRATARHTPAHPPARRSTRKARASASSAGPRDTSSDAST
AKQGARSHSTGSLRAPRAQAARSSPPSSRDGHATLTHGDRVLFPDAGLTKSDVFEYYREV
APLMVPVLEDRPISVQQWPAGIEAPGFFRHELSGIPAWVPTQRVRHLDKTLRHVNVNGEE
PLLWLANQSALTLHMWLSRAPKLSQPDFLAMDLDPGKGGWSDVVTVALALRELLEEQGLQ
SYPKTSGKRGLHVMIPLAPGHTYAKVQAHADALAHALEAQLGGLATTVRGIRERKGRLYL
DAGQNARGKTVVAPYSLRAKAGAPFSAPLKWSEVTRRLDPARFNLRTLKKRLDKVGDLFA
PALKHPQRLPD
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
gtgaaccgcgcacgcacacgactccagacctaccgccgcaagcgggacttccgccgcacc
cccgaacccgctccggaggcgccagcctcctcggacggcgcgccggtcttcgtggtgcac
aagcacgacgccaccagcctccactacgacttgcgactggagatcgatggcgcgctggcg
agctgggccgtgcccaagggccccagctatgacccgggtgacaagcggctcgcggtggag
accgaggaccatcccctcgcgtacgccgacttcgagggccacatccccgacgatgcctac
ggcggtggggactcgctgctctgggaccggggcacgttcgacacggtgcctccgggacag
gcccacgcacagcgcgagcacgggcggctccacgtcgagctgcggggcgagaagctgcgg
ggacgctggcacctcatccgcacccggctccgagggagcgcgaagaagccgcagtggctg
ctcttcaaggcgaaggacgagacggcggacccgtcgctcgacatcaccacggagcggccc
gagtcggtgaagagcggacaggtggagacacggggtccggtgaagcggggcgcgaggaag
aggcccgcgtcgcgcgcgcgtgaggtcgcggccaaaccctccacgaagaagcggaagcct
catgcactggagacgcctcgcacgccggcgaagctgctggagcggctgggcgcgcccatg
ctggcgcgactggcggtgccggaggaggtcactgacgcgacgcacgtctacgaggtgaag
tacgacggcttccgcgcgctggcggcgctcgtgggcggcaagctcgcgctgcggagtcgg
cggggcaatgacctgtcgaagcgcttccccgcgctcgccgaggcactaagcgagctgggc
gtgaaggacgtggtgctggacggcgaaatcgtcgcgctggatgcgaagggccgctcacgc
ttccagttgctccagcagggcctggagggcgtggagcagcgcttcgtggtgttcgacatc
ccctggctcgacggcgaggacctgcgaagcctgccgctggaggagcgacgggcgcggctg
gagcgggtgatgaagcgcgtgaagctcccgctccagctctcggagcgcatcgagctcccg
atgaagcgcgcgctggaccaggcgcgcaggaagggctgggaggggctcatcgcgaagcgg
cgaggctccacgtacgtggacacgcgctcgggcgactggctcaagctcaaggtggtagcg
gggcaggaggtggtcatcctcgggtacctgcccatccagaacgagcgctccgagacggag
ctcggcgcgctgctcgtcggggtgcatcgcgaggacggcttccacgacgtgggcaaggtc
ggcacgggcttcacgtcgaaggaccggcgcgagctgcgcgcgctgctggacgaggacgtg
gtgcgcgagcccgccgccgtggacgcgaagccccggaagggcgcggtgtgggtgaagcct
cgccacgtggcccaggtgaacttcagcgagtggaccgaggacggacggctgcgccagccc
gtgtaccaggggctgcgcatcgacaaggcgccgacggaggtggtccgtgagcgtcccgcg
cctgtcgcgcgtgagcatggcacctcgcgacagcccgctcgcacgtcgaccgcgtccatc
gattctcgcgctaccgcgcggcacacgcccgcccatccacccgcgcgccgctcgactcgg
aaggctcgcgcgtcggcatcgtctgccgggcctcgtgacacgagctccgatgcctccacc
gcgaagcaaggcgcacgcagtcactcgacgggctcgctgagagcaccgcgcgcccaggcc
gcgcgctcctccccgccctcatcgcgcgacggacacgccacgctgacgcacggggaccgc
gtcctcttcccagatgccggcctgacgaagtcggatgtcttcgagtactaccgcgaggtt
gcgcccctgatggtccccgtcctcgaggaccgtcccatctccgtgcagcagtggcccgcg
ggcatcgaggccccgggcttcttccgacacgagctgtcgggcatccccgcgtgggtaccc
acccagcgcgtgcgccacctggacaagacgctgcgccacgtgaacgtgaacggcgaggag
ccgctgctgtggctcgccaaccaatccgcgctcacgctccacatgtggctgagccgcgcg
cccaagctgtcgcagcccgacttcctcgccatggacctggatccgggcaagggcggctgg
tccgacgtggtgacggtggcgctcgcgctgcgcgagctgctcgaggaacaaggtctccag
agctaccccaagacctccggcaagcgcggcctgcacgtcatgattcccctggcccccgga
cacacgtacgcgaaggtccaggcccacgcggacgccctggcccatgcgctggaggcgcag
ctgggtgggctggccaccacggtgcgcggcatccgcgagcgcaagggccggctgtacctg
gacgcgggacagaacgcgcgcggaaagaccgtcgtggcgccctactccctccgggccaag
gcgggcgcgcccttctccgcgcccctgaagtggagcgaggtcacccgacgcctcgacccc
gcgcgcttcaacctccgcacgctcaagaagcgcctggacaaggtgggagacctgttcgct
cccgcgttgaagcatccacagcggctgccggactga
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