KEGG   Myxococcus fulvus: MFUL124B02_19155
Entry
MFUL124B02_19155  CDS       T06896                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
mfb  Myxococcus fulvus
Pathway
mfb03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:mfb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    MFUL124B02_19155
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mfb03021]
    MFUL124B02_19155
   03400 DNA repair and recombination proteins [BR:mfb03400]
    MFUL124B02_19155
Enzymes [BR:mfb01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     MFUL124B02_19155
Transcription machinery [BR:mfb03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     MFUL124B02_19155
DNA repair and recombination proteins [BR:mfb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      MFUL124B02_19155
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_45 RnfC_N
Other DBs
NCBI-ProteinID: AKF81274
LinkDB
Position
4757149..4761378
AA seq 1409 aa
MPTQIQNNFRVRKTFAKIAKIIDIPNLINIQKQSYEKFLQADIAPEKREDLGLQGVFNSV
FPIRDFNETSSLEFVSYHLEKPKYDVDECHQRGMTYSAPIKVVVRLVVWDKDEETGAQSI
RDVKEQEVYFGEIPLMTQNGTFIINGTERVVVSQLHRSPGAFFDHDKGKSHSSGKLLYNA
RIIPYRGSWIDFEFDHKDLLYVRIDRRRKLPATVLIRALGAVSDTAKKNPLEFKGSTEEI
LNYYYATETIYLQTAADFEKSVELELLPGQRATRDIKTKTGELIVKKNRKFTRVAIKKLE
AAKMKTLPIDADELFTKVSAYDVVDENTGEVILECNEEVSQEKVDELLKRNIKEFKVLFI
DNLNVGPYLRETLMLDKLETPEQSIMEIYRRLRPGDPPTPETAINLFTNLFFNPERYDLS
KVGRLKLNFKFGLEEPLDGQILTKRDILEVIRYLIDLKNGKGTIDDIDHLGNRRVRAVGE
LLENQYRIGLVRMERAIKERMSLQEIETLMPHDLINAKPVTAVIKEFFGSSQLSQFMDQT
NPLSEVTHKRRLSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLIASLSTY
ARVNEFGFVETPYRKVDAGVVTTDVAFYSALEEEKHTIAQANAETDKKGKFVNALVSSRR
GGEFVQARAEDVDLMDVSPNQLVSVAASLIPFLENDDANRALMGSNMQRQAVPLLRTSAP
LVGTGIEAIVARDSGVTCVARRDGTVESVDAGRIVVKADVPASLSDVSSEVDIYNLLKYQ
RSNQNTCLNQKPIISKGDKVRKGDVIADGPATETGELALGQNVVVAFMPWQGYNFEDSIL
ISERILKDDVFTSIHIEEFECIARDTKLGKEEITRDIPNVGEEALKDLDESGIIRIGAEV
KPGDVLVGKITPKGETQLSPEEKLLRAIFGEKAGDVRDSSLRVPPGVVGTVINAKVFSRK
GVEKDERAKQIESMEEAKLLKDQNDEIKVLQDSAIGRIRALVRGKEVQGKLVDDKGKILL
KKGDILDDALLATVPYKYWGEISVGDPLDSRVRDILRNLEETKEAVKLAFGEKIARIKKG
DELPPGVIKMVKVYVAIKRKLAVGDKMAGRHGNKGVVSRILPEEDMPYLEDGRPVDIVLN
PLGVPSRMNIGQILETHLGWAAKGTGEALQRYVEDNWGAEAIKERLKVIYGAETPFAAFL
DKLDEEEIRQLCRRSKRGIHVATPVFDGAQELEIHQLLDEGKLPRTGQMVLFDGRTGEPF
DQNVTVGVMYMLKLHHLVDEKIHARSIGPYSLVTQQPLGGKAQFGGQRLGEMEVWAMEAY
GAAYTLQEFLTVKSDDVVGRTRMYEAIVKGDNVLESGLPESFNVLLKELQSLALDVELLE
SAPPERQRSFGGDFLGGGDGEERKTGTEA
NT seq 4230 nt   +upstreamnt  +downstreamnt
atgccgacgcagatccagaacaatttccgcgtgcggaagaccttcgcgaagatcgcgaag
atcatcgacattcccaatcttatcaacatccagaagcagtcctacgagaagttcctccag
gccgatatcgccccggagaagcgtgaggacctcggacttcagggtgtcttcaactcggtt
ttcccgattcgggatttcaacgagacgtcgtcgctggagttcgtcagctaccacctggag
aagccgaagtacgatgtcgatgagtgccaccagcgtggcatgacctactccgcccccatc
aaggtggtcgttcgcctggtggtgtgggacaaggacgaggagaccggcgcgcagtccatc
cgtgacgtgaaggagcaggaggtctacttcggggaaatcccgttgatgacccagaacggc
accttcatcatcaacggcacggagcgcgtggtcgtcagccagctgcatcgcagcccgggc
gcgttcttcgaccacgacaagggcaagagccactcgtcgggcaagctgctgtacaacgcc
cgcatcattccctaccgcggttcgtggatcgacttcgagttcgaccacaaggacctgctg
tacgtgcgcatcgaccggcgccgcaagctgcccgccacggtgctcatccgcgccctgggc
gccgtcagcgacaccgcgaagaagaacccgctggagttcaagggctccaccgaggagatc
ctcaactactactacgccacggagaccatctacctccagacggcggcggacttcgagaag
agcgtcgagctggagctgctccccggccagcgcgccacccgtgacatcaagacgaagacg
ggtgagctgatcgtcaagaagaaccgcaagttcacccgcgtcgccatcaagaagctcgag
gcggcgaagatgaagacgctgcccatcgacgcggacgagctcttcacgaaggtgtccgcg
tacgacgtggtggacgagaacaccggtgaggtcatcctcgagtgcaacgaggaagtctcg
caggagaaggtggacgagctcctcaagcgcaacatcaaggagttcaaggtcctcttcatc
gacaacctcaacgtgggtccctacctgcgtgagacgctcatgctggacaagctcgagacg
cccgagcagtccatcatggagatctaccgtcgtctgcgtcctggcgatccgccgacgccg
gagacggccatcaacctgttcacgaacctgttcttcaaccccgagcgctacgacctgtcc
aaggtgggtcgcctcaagttgaacttcaagttcggcctcgaggagccgctcgacgggcag
atcctcaccaagcgggacatcctcgaggtgatccgctacctgatcgacctgaagaacggc
aagggcaccatcgacgacatcgaccacctcggcaaccggcgcgttcgcgcggtgggcgag
ctgctcgagaaccagtaccgcatcggtctggttcgcatggagcgggcgatcaaggagcgc
atgagcctccaggagatcgagacgctcatgccgcacgatctcatcaacgccaagcccgtc
acggcggtcatcaaggagttcttcgggtccagccagctgtcgcagttcatggaccagacg
aaccccctgtccgaggtgacgcacaagcgtcgtctgtccgcgctcgggcccggtggcctc
acgcgtgagcgcgcgggcttcgaggtccgcgacgtccacccgacgcactacggccgcatc
tgccccatcgagacgccggaaggtccgaacatcggcctcatcgcgtccttgtccacctac
gcgcgcgtcaacgagttcggcttcgtggagacgccgtaccgcaaggtcgacgcgggcgtc
gtgacgacggacgtggccttctactcggcgctcgaggaggagaagcacaccatcgcgcag
gcgaacgcggagacggacaagaagggcaagttcgtcaacgcgctcgtgtccagccgccgc
ggcggtgagttcgtccaggcgcgcgccgaggacgtggacctgatggacgtgtcgccgaac
cagctggtgtcggtggccgcgtcgctcatcccgttcctggagaacgacgacgccaaccgc
gccctcatgggctcgaacatgcagcgccaggcggtgccgctgctgcgcaccagcgctccg
ctggtgggcacgggcatcgaggccatcgtcgcgcgcgactcgggcgtgacgtgcgtcgcg
cgccgtgacggcacggtggagagcgtggacgccggccgcatcgtggtgaaggcggacgtg
ccggcctcgctgagcgacgtgtcgagcgaggtcgacatctacaacctgctcaagtaccag
cgctccaaccagaacacctgcctcaaccagaagcccatcatcagcaagggcgacaaggtc
cggaagggtgacgtcatcgccgacggcccggccaccgagacgggtgagctggcgctgggg
cagaacgtggtcgtcgcgttcatgccgtggcagggctacaacttcgaggactccatcctc
atcagcgagcgcatcctcaaggacgacgtcttcacgtcgatccacatcgaggagttcgag
tgcatcgcgcgcgacaccaagctgggcaaggaggagatcacccgcgacatcccgaacgtg
ggtgaggaggccctcaaggacctcgacgagtccggcatcatccgcatcggcgccgaggtg
aagcccggcgacgtgctggtgggcaagatcaccccgaagggcgagacgcagctgtctccc
gaagagaagctcctgcgagccatcttcggcgagaaggccggcgacgtgcgcgacagctcc
ctgcgcgtgcccccgggcgtcgtgggcaccgtcatcaacgccaaggtgttcagccgcaag
ggcgtggagaaggacgagcgcgccaagcagatcgagtccatggaggaggcgaagctcctc
aaggaccagaacgacgagatcaaggtcctccaggacagcgccatcggccgcatccgcgcg
ctggtccgcggcaaggaggtccagggcaagctcgtggacgacaaggggaagatcctcctg
aagaagggggacatcctcgacgacgcgctgctggccacggtgccctacaagtactggggt
gagatctccgtcggcgacccgctcgactcccgcgtgcgcgacatcctgcgcaacctggag
gagacgaaggaggccgtgaagctggccttcggcgagaagatcgcccgcatcaagaagggc
gacgagctgcccccgggcgtcatcaagatggtgaaggtgtacgtcgccatcaagcgcaag
ctggccgtgggcgacaagatggccggccgccacggaaacaagggcgtcgtgtcccgcatc
ctccccgaggaggacatgccgtacctggaggacggccgtccggtggacatcgtcctcaac
ccgctcggcgttcccagccgcatgaacatcgggcagatcctcgagacgcacctgggctgg
gccgccaagggcaccggcgaggcgctgcagcgctacgtggaggacaactggggcgcggag
gccatcaaggagcgcctcaaggtcatctacggcgcggagaccccgttcgcggcgttcctc
gacaagctggacgaggaggagatccgccagctgtgccgtcgctccaagcgcggcatccac
gtggcgacgccggtgttcgacggcgcccaggagctggagatccaccagctgctcgacgag
ggcaagctgccccgcacgggccagatggtgctcttcgacggccgcacgggtgagccgttc
gaccagaacgtcaccgtgggcgtgatgtacatgctcaagctgcaccacctggtcgacgag
aagatccacgcgcgctccatcgggccttactccctggtcacccagcagccgctgggcggc
aaggcgcagttcggcggtcagcgtctgggcgagatggaagtctgggcgatggaggcctac
ggcgcggcgtacacgctgcaggagttcctcaccgtcaagtcggacgacgtggtgggccgc
acgcgcatgtacgaggccatcgtcaagggcgacaacgtcctggagagcggcctgcccgag
tcgttcaacgtgctcctcaaggagctccagtcgctcgcgctggacgtcgagctgctcgag
agcgcccccccggagcggcagcgcagcttcggcggcgacttcctcggcggtggtgacggc
gaggagcgcaagaccgggaccgaggcctga

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