Entry |
|
Name |
(GenBank) DNA-directed RNA polymerase subunit beta
|
KO |
|
Organism |
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:mfb00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MFUL124B02_19155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:mfb03021]
MFUL124B02_19155
03400 DNA repair and recombination proteins [BR:mfb03400]
MFUL124B02_19155
Enzymes [BR:mfb01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MFUL124B02_19155
Transcription machinery [BR:mfb03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MFUL124B02_19155
DNA repair and recombination proteins [BR:mfb03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MFUL124B02_19155
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
4757149..4761378
|
AA seq |
1409 aa
MPTQIQNNFRVRKTFAKIAKIIDIPNLINIQKQSYEKFLQADIAPEKREDLGLQGVFNSV
FPIRDFNETSSLEFVSYHLEKPKYDVDECHQRGMTYSAPIKVVVRLVVWDKDEETGAQSI
RDVKEQEVYFGEIPLMTQNGTFIINGTERVVVSQLHRSPGAFFDHDKGKSHSSGKLLYNA
RIIPYRGSWIDFEFDHKDLLYVRIDRRRKLPATVLIRALGAVSDTAKKNPLEFKGSTEEI
LNYYYATETIYLQTAADFEKSVELELLPGQRATRDIKTKTGELIVKKNRKFTRVAIKKLE
AAKMKTLPIDADELFTKVSAYDVVDENTGEVILECNEEVSQEKVDELLKRNIKEFKVLFI
DNLNVGPYLRETLMLDKLETPEQSIMEIYRRLRPGDPPTPETAINLFTNLFFNPERYDLS
KVGRLKLNFKFGLEEPLDGQILTKRDILEVIRYLIDLKNGKGTIDDIDHLGNRRVRAVGE
LLENQYRIGLVRMERAIKERMSLQEIETLMPHDLINAKPVTAVIKEFFGSSQLSQFMDQT
NPLSEVTHKRRLSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLIASLSTY
ARVNEFGFVETPYRKVDAGVVTTDVAFYSALEEEKHTIAQANAETDKKGKFVNALVSSRR
GGEFVQARAEDVDLMDVSPNQLVSVAASLIPFLENDDANRALMGSNMQRQAVPLLRTSAP
LVGTGIEAIVARDSGVTCVARRDGTVESVDAGRIVVKADVPASLSDVSSEVDIYNLLKYQ
RSNQNTCLNQKPIISKGDKVRKGDVIADGPATETGELALGQNVVVAFMPWQGYNFEDSIL
ISERILKDDVFTSIHIEEFECIARDTKLGKEEITRDIPNVGEEALKDLDESGIIRIGAEV
KPGDVLVGKITPKGETQLSPEEKLLRAIFGEKAGDVRDSSLRVPPGVVGTVINAKVFSRK
GVEKDERAKQIESMEEAKLLKDQNDEIKVLQDSAIGRIRALVRGKEVQGKLVDDKGKILL
KKGDILDDALLATVPYKYWGEISVGDPLDSRVRDILRNLEETKEAVKLAFGEKIARIKKG
DELPPGVIKMVKVYVAIKRKLAVGDKMAGRHGNKGVVSRILPEEDMPYLEDGRPVDIVLN
PLGVPSRMNIGQILETHLGWAAKGTGEALQRYVEDNWGAEAIKERLKVIYGAETPFAAFL
DKLDEEEIRQLCRRSKRGIHVATPVFDGAQELEIHQLLDEGKLPRTGQMVLFDGRTGEPF
DQNVTVGVMYMLKLHHLVDEKIHARSIGPYSLVTQQPLGGKAQFGGQRLGEMEVWAMEAY
GAAYTLQEFLTVKSDDVVGRTRMYEAIVKGDNVLESGLPESFNVLLKELQSLALDVELLE
SAPPERQRSFGGDFLGGGDGEERKTGTEA |
NT seq |
4230 nt +upstreamnt +downstreamnt
atgccgacgcagatccagaacaatttccgcgtgcggaagaccttcgcgaagatcgcgaag
atcatcgacattcccaatcttatcaacatccagaagcagtcctacgagaagttcctccag
gccgatatcgccccggagaagcgtgaggacctcggacttcagggtgtcttcaactcggtt
ttcccgattcgggatttcaacgagacgtcgtcgctggagttcgtcagctaccacctggag
aagccgaagtacgatgtcgatgagtgccaccagcgtggcatgacctactccgcccccatc
aaggtggtcgttcgcctggtggtgtgggacaaggacgaggagaccggcgcgcagtccatc
cgtgacgtgaaggagcaggaggtctacttcggggaaatcccgttgatgacccagaacggc
accttcatcatcaacggcacggagcgcgtggtcgtcagccagctgcatcgcagcccgggc
gcgttcttcgaccacgacaagggcaagagccactcgtcgggcaagctgctgtacaacgcc
cgcatcattccctaccgcggttcgtggatcgacttcgagttcgaccacaaggacctgctg
tacgtgcgcatcgaccggcgccgcaagctgcccgccacggtgctcatccgcgccctgggc
gccgtcagcgacaccgcgaagaagaacccgctggagttcaagggctccaccgaggagatc
ctcaactactactacgccacggagaccatctacctccagacggcggcggacttcgagaag
agcgtcgagctggagctgctccccggccagcgcgccacccgtgacatcaagacgaagacg
ggtgagctgatcgtcaagaagaaccgcaagttcacccgcgtcgccatcaagaagctcgag
gcggcgaagatgaagacgctgcccatcgacgcggacgagctcttcacgaaggtgtccgcg
tacgacgtggtggacgagaacaccggtgaggtcatcctcgagtgcaacgaggaagtctcg
caggagaaggtggacgagctcctcaagcgcaacatcaaggagttcaaggtcctcttcatc
gacaacctcaacgtgggtccctacctgcgtgagacgctcatgctggacaagctcgagacg
cccgagcagtccatcatggagatctaccgtcgtctgcgtcctggcgatccgccgacgccg
gagacggccatcaacctgttcacgaacctgttcttcaaccccgagcgctacgacctgtcc
aaggtgggtcgcctcaagttgaacttcaagttcggcctcgaggagccgctcgacgggcag
atcctcaccaagcgggacatcctcgaggtgatccgctacctgatcgacctgaagaacggc
aagggcaccatcgacgacatcgaccacctcggcaaccggcgcgttcgcgcggtgggcgag
ctgctcgagaaccagtaccgcatcggtctggttcgcatggagcgggcgatcaaggagcgc
atgagcctccaggagatcgagacgctcatgccgcacgatctcatcaacgccaagcccgtc
acggcggtcatcaaggagttcttcgggtccagccagctgtcgcagttcatggaccagacg
aaccccctgtccgaggtgacgcacaagcgtcgtctgtccgcgctcgggcccggtggcctc
acgcgtgagcgcgcgggcttcgaggtccgcgacgtccacccgacgcactacggccgcatc
tgccccatcgagacgccggaaggtccgaacatcggcctcatcgcgtccttgtccacctac
gcgcgcgtcaacgagttcggcttcgtggagacgccgtaccgcaaggtcgacgcgggcgtc
gtgacgacggacgtggccttctactcggcgctcgaggaggagaagcacaccatcgcgcag
gcgaacgcggagacggacaagaagggcaagttcgtcaacgcgctcgtgtccagccgccgc
ggcggtgagttcgtccaggcgcgcgccgaggacgtggacctgatggacgtgtcgccgaac
cagctggtgtcggtggccgcgtcgctcatcccgttcctggagaacgacgacgccaaccgc
gccctcatgggctcgaacatgcagcgccaggcggtgccgctgctgcgcaccagcgctccg
ctggtgggcacgggcatcgaggccatcgtcgcgcgcgactcgggcgtgacgtgcgtcgcg
cgccgtgacggcacggtggagagcgtggacgccggccgcatcgtggtgaaggcggacgtg
ccggcctcgctgagcgacgtgtcgagcgaggtcgacatctacaacctgctcaagtaccag
cgctccaaccagaacacctgcctcaaccagaagcccatcatcagcaagggcgacaaggtc
cggaagggtgacgtcatcgccgacggcccggccaccgagacgggtgagctggcgctgggg
cagaacgtggtcgtcgcgttcatgccgtggcagggctacaacttcgaggactccatcctc
atcagcgagcgcatcctcaaggacgacgtcttcacgtcgatccacatcgaggagttcgag
tgcatcgcgcgcgacaccaagctgggcaaggaggagatcacccgcgacatcccgaacgtg
ggtgaggaggccctcaaggacctcgacgagtccggcatcatccgcatcggcgccgaggtg
aagcccggcgacgtgctggtgggcaagatcaccccgaagggcgagacgcagctgtctccc
gaagagaagctcctgcgagccatcttcggcgagaaggccggcgacgtgcgcgacagctcc
ctgcgcgtgcccccgggcgtcgtgggcaccgtcatcaacgccaaggtgttcagccgcaag
ggcgtggagaaggacgagcgcgccaagcagatcgagtccatggaggaggcgaagctcctc
aaggaccagaacgacgagatcaaggtcctccaggacagcgccatcggccgcatccgcgcg
ctggtccgcggcaaggaggtccagggcaagctcgtggacgacaaggggaagatcctcctg
aagaagggggacatcctcgacgacgcgctgctggccacggtgccctacaagtactggggt
gagatctccgtcggcgacccgctcgactcccgcgtgcgcgacatcctgcgcaacctggag
gagacgaaggaggccgtgaagctggccttcggcgagaagatcgcccgcatcaagaagggc
gacgagctgcccccgggcgtcatcaagatggtgaaggtgtacgtcgccatcaagcgcaag
ctggccgtgggcgacaagatggccggccgccacggaaacaagggcgtcgtgtcccgcatc
ctccccgaggaggacatgccgtacctggaggacggccgtccggtggacatcgtcctcaac
ccgctcggcgttcccagccgcatgaacatcgggcagatcctcgagacgcacctgggctgg
gccgccaagggcaccggcgaggcgctgcagcgctacgtggaggacaactggggcgcggag
gccatcaaggagcgcctcaaggtcatctacggcgcggagaccccgttcgcggcgttcctc
gacaagctggacgaggaggagatccgccagctgtgccgtcgctccaagcgcggcatccac
gtggcgacgccggtgttcgacggcgcccaggagctggagatccaccagctgctcgacgag
ggcaagctgccccgcacgggccagatggtgctcttcgacggccgcacgggtgagccgttc
gaccagaacgtcaccgtgggcgtgatgtacatgctcaagctgcaccacctggtcgacgag
aagatccacgcgcgctccatcgggccttactccctggtcacccagcagccgctgggcggc
aaggcgcagttcggcggtcagcgtctgggcgagatggaagtctgggcgatggaggcctac
ggcgcggcgtacacgctgcaggagttcctcaccgtcaagtcggacgacgtggtgggccgc
acgcgcatgtacgaggccatcgtcaagggcgacaacgtcctggagagcggcctgcccgag
tcgttcaacgtgctcctcaaggagctccagtcgctcgcgctggacgtcgagctgctcgag
agcgcccccccggagcggcagcgcagcttcggcggcgacttcctcggcggtggtgacggc
gaggagcgcaagaccgggaccgaggcctga |