| Entry |
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| Symbol |
truD
|
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| Name |
(GenBank) tRNA pseudouridine synthase D TruD
|
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| KO |
|
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| Organism |
mfc Methanobacterium formicicum BRM9
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| Brite |
KEGG Orthology (KO) [BR:mfc00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:mfc03016]
BRM9_0131 (truD)
Enzymes [BR:mfc01000]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
BRM9_0131 (truD)
Transfer RNA biogenesis [BR:mfc03016]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BRM9_0131 (truD)
Prokaryotic type
BRM9_0131 (truD)
|
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| SSDB |
|
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
138277..139467
|
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| AA seq |
396 aa
MKISTWKKSRKLPPSGEGPNTWIWIEKNGRTTLDVVLDIARELKINRKQMGFAGMKDKRA
ITRQWICISNKTPEELQGLEDKLHHVKIINIVPNQKKLRMGQLIGNKFRLMVRDVGDTEP
AAQEATKILNELEKRGVANYYGFQRFGKDRPNTHLVGKALIKGGVKDAVDRYIGHPYDTE
PRHIQEARRLYDQGELEESLESMPSGMRYEKMMLRTLIKEKNKRGELVENSYIRALRSLP
KPLSRMFVHAYQSYLFNRAVSERSKLGIDQYVEGDILIDNEEHLIHEFSREEINQEIKNF
QAHPSSPLYGSKVPLAGGKLGEMEQKILDEENLKLDDFEVPPMPKLGSHGIRRAMRFRIW
DVAAEATEEGVLLSFSIPKGCYATSVLREVMKKDVY |
|---|
| NT seq |
1191 nt +upstreamnt +downstreamnt
atgaagatttctacgtggaagaaatcccggaaactcccccccagtggtgagggacccaac
acctggatctggattgaaaagaacggtagaaccactctggatgttgttctggatattgcc
cgggaacttaaaatcaaccgtaaacagatgggattcgcgggaatgaaagataaaagggca
ataactcgacaatggatttgtatcagtaacaaaactcctgaagaacttcagggactggaa
gataagctccatcatgttaaaataatcaacatagttcctaaccagaagaaattacgtatg
ggacagttgatcggaaacaagtttcgtttaatggtgcgcgatgtgggtgatactgaacca
gcagctcaggaagcaacaaaaatccttaacgaactggaaaaaaggggagtggccaattat
tatggatttcagcgtttcggtaaggaccggcccaacacccacctggtgggtaaagccctg
atcaagggaggtgttaaggatgcggtggatcgctacattggccatccctatgacaccgag
ccccgacacattcaggaagcccgcagattgtatgaccagggagaactggaagaatccctg
gaatcaatgcccagtggaatgagatatgaaaagatgatgctacgtaccctcattaaagaa
aaaaataaacggggggaactggttgagaattcctacatcagagcgttgcgtagccttccc
aaacccctcagcaggatgtttgtccacgcgtatcagtcctatctgttcaaccgggcagtc
agcgaacgcagtaaactgggcattgaccagtacgtggaaggggatattctgatcgacaac
gaagaacacctgatccatgaattttccagggaagaaattaatcaggagataaagaatttc
caggcccatccttcctcacctctttatggtagtaaagtgcccctggctggtggtaagctg
ggagagatggagcagaaaattttggatgaggaaaaccttaaactggatgatttcgaggta
cctcccatgcctaaattaggtagtcatggcatacgccgggccatgaggttcaggatatgg
gatgttgctgccgaggcaactgaagaaggagtactgttgagtttttccattcccaaaggt
tgctacgctaccagtgttcttcgagaggttatgaagaaagatgtttattga |
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