Methanobacterium formicicum BRM9: BRM9_0359
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Entry
BRM9_0359 CDS
T03396
Symbol
idsA
Name
(GenBank) bifunctional short chain isoprenyl diphosphate synthase IdsA
KO
K13787
geranylgeranyl diphosphate synthase, type I [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
mfc
Methanobacterium formicicum BRM9
Pathway
mfc00900
Terpenoid backbone biosynthesis
mfc01100
Metabolic pathways
mfc01110
Biosynthesis of secondary metabolites
Module
mfc_M00365
C10-C20 isoprenoid biosynthesis, archaea
Brite
KEGG Orthology (KO) [BR:
mfc00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
BRM9_0359 (idsA)
09110 Biosynthesis of other secondary metabolites
00997 Biosynthesis of various other secondary metabolites
BRM9_0359 (idsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
mfc01006
]
BRM9_0359 (idsA)
Enzymes [BR:
mfc01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
BRM9_0359 (idsA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
BRM9_0359 (idsA)
2.5.1.29 geranylgeranyl diphosphate synthase
BRM9_0359 (idsA)
Prenyltransferases [BR:
mfc01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
BRM9_0359 (idsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
DUF7114
TPR_19
Motif
Other DBs
NCBI-ProteinID:
AIS31186
UniProt:
A0A090I4G2
LinkDB
All DBs
Position
complement(372463..373452)
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AA seq
329 aa
AA seq
DB search
MEVTEILKKYSADIDQEITAALEEVDPETLRQASEHLVKAGGKKLRPSLVVLSAEAVGGQ
VKSALKTGAAVELIHTFSLIHDDIMDQDEKRRGKPSVHVLWGEPTAILAGDTLFSKAFET
VMRSEEDGVPAPTILPALNAVVDSCVKICEGQALDMGFAERTDVTEEEYLNMIFKKTAAL
IAAATKAGAIVGGGTPEQIEALSEYGRLIGMAFQIQDDYLDVASSEEDLGKPVGSDIVEG
KMTLLVVNALARASEEDHNRLLTILKEEGDEHVSEAMEIMEKYGSIEYAWQVAQEDVNQA
KQLLRDVLDDSPAREALLLIADFVLQRSN
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggaagtaactgagatcctcaaaaaatactctgcagacatagaccaggagataactgca
gccctggaagaagtagacccggaaacactacgccaggcatcagaacacctggtcaaggcc
ggtgggaagaaactacgcccctcgctggtggtactaagcgccgaagcagtgggtggccag
gttaaatccgccctgaaaaccggggcagcagtggaactcatccacactttcagcctcatc
cacgatgacatcatggaccaggatgaaaaacgccgagggaaaccctcggtacacgtactc
tggggagaaccaaccgccatacttgccggggacaccctcttctccaaggcctttgaaacc
gtgatgaggagtgaagaagacggagtaccggcacccactatcctacctgcactcaacgcc
gtggtggacagttgtgtgaagatctgtgaaggccaggccttggacatgggatttgccgaa
cgtaccgatgtcaccgaggaagaatacctcaacatgatcttcaagaaaaccgcagccctt
attgccgctgccaccaaagccggagctatagtcgggggaggaacacccgaacagatcgaa
gccctctccgagtacggccgactcattggtatggcctttcagatacaggacgactacctg
gatgtggccagcagtgaagaagacctgggaaaaccagtgggcagtgacatagtagagggt
aaaatgactctcctggtggtaaacgccctggcccgggccagtgaagaggaccataaccga
ttactcaccatcctcaaagaagagggtgatgaacatgtgtccgaggccatggagatcatg
gaaaaatacggctccatagagtatgcctggcaggtggctcaggaagatgttaaccaggcc
aaacagttactccgggatgtattggatgacagccctgcccgggaagcactcctgctcatt
gcggactttgtactccagcgcagtaactaa
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