KEGG   Methanobacterium formicicum BRM9: BRM9_1125
Entry
BRM9_1125         CDS       T03396                                 
Name
(GenBank) HD/OB-fold nucleic acid binding domain-containing protein
  KO
K03698  3'-5' exoribonuclease [EC:3.1.-.-]
Organism
mfc  Methanobacterium formicicum BRM9
Brite
KEGG Orthology (KO) [BR:mfc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mfc03019]
    BRM9_1125
Messenger RNA biogenesis [BR:mfc03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     BRM9_1125
SSDB
Motif
Pfam: HD tRNA_anti-codon TraI_2 HDOD COG6_N Cas3_HD zf-C4H2
Other DBs
NCBI-ProteinID: AIS31941
UniProt: A0A089ZAY9
LinkDB
Position
1141835..1142740
AA seq 301 aa
MFKEEKDFIENLNSVRRISTSFVIASATVKKARNGKDYLEFSLTDKSGQITARMFPNRNA
HEIYDTINEKCIYQINGVVDEFPRNSQNFSIKIDDLQALEEDYYQLDDFIRTSSKDREEL
LDEIKNTVEEMENIYLKNLLNSFFTDPEFTQEFCTAPSAKVYHHNYVGGLLEHSVEVLQI
CRTMCHIFPQLDQDLLYTGAILHDVGKLKAYDYDLISIDISNEGKLLDHLFISAEMVKEK
INILDMDMPEELQTQVLHLILSHHGAVRNGWGSPVDPKTPEAIALHHADDLDAKVKGSIQ
K
NT seq 906 nt   +upstreamnt  +downstreamnt
atgtttaaagaggaaaaagatttcattgaaaacttgaacagtgtgagaagaatcagtacc
tcatttgttatagccagtgccacagtcaaaaaggcgcgcaacggtaaagactaccttgaa
tttagtttaactgataaaagtggtcagataacggcgcgaatgtttcccaaccgcaatgcc
catgagatctacgatacaattaatgagaaatgcatttaccagataaatggagtggtagat
gagtttccccgtaactcccagaatttcagcataaaaattgatgatctgcaggccctggaa
gaagattattaccagctggatgatttcatccgaacatccagtaaagaccgggaagaactt
ctagatgagattaaaaacacggtggaagaaatggaaaacatctatcttaagaatctactt
aattcctttttcactgaccccgaatttacccaggaattttgcaccgcaccttcggcaaaa
gtttaccaccacaactatgtagggggtttactggagcacagtgtagaagtactgcaaata
tgcagaactatgtgccatatattccctcagctggaccaggatctcttatataccggggca
atactccatgacgtgggtaaattaaaggcctatgactatgatctcatcagtattgacatc
tccaacgagggaaaactattggatcatctattcatctctgcagaaatggttaaagagaag
attaacatcttagatatggatatgccagaagaactacaaacccaagtgttacatttaata
ctgagccatcatggcgctgttcgaaatggatggggctcaccagttgatcccaaaactccc
gaagcaattgccttgcatcatgccgatgatttagatgcaaaggttaagggatcaatccaa
aaataa

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