Methanobacterium formicicum BRM9: BRM9_1158
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Entry
BRM9_1158 CDS
T03396
Name
(GenBank) ATP-dependent DNA helicase UvrD/REP family
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mfc
Methanobacterium formicicum BRM9
Pathway
mfc03420
Nucleotide excision repair
mfc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mfc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BRM9_1158
03430 Mismatch repair
BRM9_1158
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfc03400
]
BRM9_1158
Enzymes [BR:
mfc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BRM9_1158
DNA repair and recombination proteins [BR:
mfc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BRM9_1158
MMR (mismatch excision repair)
Other MMR factors
BRM9_1158
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
AAA_30
DEAD
UvrD_C_2
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AIS31974
UniProt:
A0A089ZV81
LinkDB
All DBs
Position
complement(1173000..1175315)
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AA seq
771 aa
AA seq
DB search
MISWETYQNIVIEHLNRKISSADNPDQHQAISASTGESQFLVAGPGSGKTTVMVLKILKF
IYVDDVHPSSILATTFTRKAATELRSRILSWGDEIRQVLLELPEFKDIHPSLRHLDFNQI
TTGTLDSISQDILKIHRAPGSAPPVVIQDFVTNALMLKVGLFQEEKHHNPELREYLVQLR
GGKFGFNTNEMARQLLEIKDRVYYDQVDWEKLHQEKINQHPGFDVAHQAINDYLQELKKR
SLYDFAMLEAEFLDQLKEGKLDDFLEGLKLVLVDEYQDSNLLQEQIYFQLARAAINNGGS
MTVVGDDDQSLYRFRGATVDLFTSFQERFQQEMPQAPQPRVIYLSQNYRSTGNIVQFCNQ
FAQLDQEFQEARVRDKPAIKPERTPPLTEFPILGMFREDVETLATDLSSFIWQVVCGEGY
RVQDYVIKVNPDEGSPTDLSILLSSPQEQAYTNKKLPYYLREKLKIPIFNPRGQSLEKTW
EASVLCGLMLDCIDPECEIQNSIEKLPYTATKNFKSWRKTAREFVETNPEPETPISLKQF
VDAWQGRQPLGRNTWKRDVPLLDLAYKLVTWIPTLQDDVEGLVYLEAITRTIAETALFSN
YGGELVFDKKFPELECYSIKEAFWNIFVPLANGAIKVDEGLLDTLPDNRINVMSIHQSKG
LEFPLVVVDICSDFRTNHPKNAFKRFPDDGGKSCTMEDEIRSCSPLGLPPRTGRDRAFDD
LIRHYFVAYSRAQDVLLLIGLTTYPDIPNVATGWTRNEAWPWDGLDNLFLI
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
ttgatatcatgggaaacatatcagaatatagtaattgagcatttaaaccggaagataagc
tctgctgacaatccggatcaacaccaggccatcagtgcttccactggtgagtcccagttc
ctggtggccgggccgggtagtgggaaaaccacggtcatggtgttgaagatactgaagttc
atctacgtggatgatgtgcacccttcttctatattggccacaaccttcaccagaaaggca
gctaccgagttacgctccaggatcctttcatggggagatgaaatacgccaggtcctcctg
gaactccctgaatttaaagacatacatccatctctaaggcacctggacttcaaccagatt
accactggcaccctggacagtatatcccaggacatactgaagatacaccgtgccccgggt
tcagccccaccagtggttatccaggactttgtaaccaatgccctcatgctcaaggtgggc
ctcttccaggaggagaaacaccataacccggaactcagggaatatctcgtccagctccgg
ggaggtaaattcgggttcaacaccaatgaaatggccagacagttactggagataaaggac
cgggtttactacgaccaggtggactgggaaaaactccaccaggaaaagataaaccagcat
cccggctttgatgtggcccatcaagccataaacgattatctccaggaacttaaaaaacgg
agcctctatgattttgccatgctggaagcagaattcctggaccagttaaaggaggggaaa
ctggacgacttcctggaaggtttgaaacttgtcctggtggatgagtaccaagattccaac
ctcctccaggagcagatctatttccagctggcacgagcagcaataaataacgggggtagt
atgactgtggtgggggatgatgaccagtccctctaccgcttccgtggtgccactgtggac
cttttcaccagtttccaggaacgattccaacaggaaatgccccaggcaccccaaccaagg
gttatctacttatcccagaactaccgttccaccggtaacattgtccagttctgtaaccag
tttgcccagctggaccaggaattccaggaagcccgggtgagggataaaccagccattaaa
ccagaaagaacaccacctctcactgagtttcccatactgggaatgttccgggaggacgtg
gaaacactggccaccgacctatccagtttcatctggcaggtagtgtgtggagagggatac
cgagtacaggactacgtgatcaaggtgaacccggatgaaggttcacccacggatctatcc
attcttttaagttctccccaggagcaggcctacacgaacaagaaattaccatattatctc
cgggagaaactgaaaatacccattttcaatcctcgaggtcagagtttagagaagacctgg
gaggccagcgtactgtgtggactcatgttagactgcattgacccggaatgtgagatacaa
aactccattgaaaaactgccctacactgccactaaaaacttcaagtcctggcggaaaact
gcccgggaatttgtggaaaccaatcccgaaccagaaacccctatatcactaaaacaattc
gttgatgcctggcaggggcgacaaccgctggggcgtaacacttggaagagagatgttccc
ctactggatctagcctataaactggtgacttggatacccaccctgcaggatgatgtggag
ggactggtttacctggaggccatcacccggaccattgccgaaactgccctcttcagtaac
tacggtggggaactggtttttgataaaaaattcccggaactggaatgttactccataaag
gaagccttctggaatatattcgtacccctggccaacggagctataaaggtggatgaggga
ttactggacaccctgcctgataaccggatcaatgtcatgtccatccaccagtccaaggga
ctggaattccccctagtggtggtggatatatgctctgattttagaactaaccatccaaaa
aatgcctttaaacgattcccagatgatggtggtaaatcctgtaccatggaagatgagata
cgttcctgttcccctctgggactacccccaagaactggaagggaccgggccttcgatgat
ctaatccggcactatttcgtggcttacagccgggcacaggatgtattactattaataggg
ttaaccacctatcctgatattcccaacgtggccacgggatggaccaggaatgaggcctgg
ccctgggatggtctggataacttgttcctgatctaa
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