Methanobacterium formicicum BRM9: BRM9_1804
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Entry
BRM9_1804 CDS
T03396
Symbol
tfe
Name
(GenBank) transcription initiation factor TFIIE alpha subunit Tfe
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
mfc
Methanobacterium formicicum BRM9
Pathway
mfc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mfc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
BRM9_1804 (tfe)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mfc03021
]
BRM9_1804 (tfe)
Transcription machinery [BR:
mfc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
BRM9_1804 (tfe)
Prokaryotic type
Archaeal type
TFE
BRM9_1804 (tfe)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
HTH_Cmi2_C
Zn_Ribbon_TF
DUF7342
HypA
TrmB
HTH_NPRL3
Rrf2
IBR
zf-UDP
HTH_5
Sigma70_r3
Motif
Other DBs
NCBI-ProteinID:
AIS32612
UniProt:
A0A090JYU4
LinkDB
All DBs
Position
complement(1850143..1850628)
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AA seq
161 aa
AA seq
DB search
MLADPNVQEILIDVTKDDENSIPIIQCLLNGKTTDEEIAEETEIRLNIVRRILYKLYDAG
VASYKRSKDPETQWYTYSWKFEEDKIAEIISDKVEKFSQELHQSLEYEEDNMFFVCPNGC
RYNFEEASERNFICPDCNTNMEFQDNSSIIMELKELQERMS
NT seq
486 nt
NT seq
+upstream
nt +downstream
nt
atgctcgcagatcccaatgtgcaggaaattctcattgatgttactaaagatgatgagaat
agcatccccattattcaatgtctattgaatggtaaaactaccgatgaggaaattgctgaa
gaaactgaaatcagacttaacattgtgagaagaatactttataagttatatgatgccggc
gtggccagctacaagagaagtaaggaccctgaaacccagtggtatacttacagctggaaa
tttgaggaagataaaatcgcggaaatcatatctgataaggttgaaaagttctcccaggaa
cttcaccagtcactggaatatgaagaagacaacatgttttttgtctgtcccaatggttgt
cgctataattttgaagaggcatcggaaagaaatttcatatgcccggactgcaacaccaac
atggagttccaggataattcatcaataattatggaattaaaggaattacaggaaaggatg
agctaa
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