Methanobacterium formicicum BRM9: BRM9_1813
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Entry
BRM9_1813 CDS
T03396
Name
(GenBank) ribosomal protein L24 family
KO
K15172
transcription elongation factor SPT5
Organism
mfc
Methanobacterium formicicum BRM9
Brite
KEGG Orthology (KO) [BR:
mfc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
BRM9_1813
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mfc03021
]
BRM9_1813
03019 Messenger RNA biogenesis [BR:
mfc03019
]
BRM9_1813
Transcription machinery [BR:
mfc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
BRM9_1813
RNA polymerase I system
BRM9_1813
Messenger RNA biogenesis [BR:
mfc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
BRM9_1813
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt5-NGN
KOW
KOW1_SPT5
DUF411
KOW4_SPT5
Motif
Other DBs
NCBI-ProteinID:
AIS32621
UniProt:
A0A089ZCU1
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All DBs
Position
1857919..1858362
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AA seq
147 aa
AA seq
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MIYAIRTLVGQEKNVARIIARNVKDSGIGVSAVLVPESLRGYILVESSTKIDLQNPAFKV
PHMKGAIEGDIPYDEIKSFLKPEPIIASIQKGSIVELISGPFKGEKAKVVRIDESREDVV
LELIEAAVPIPVTVKGDQIRLIQKEAD
NT seq
444 nt
NT seq
+upstream
nt +downstream
nt
ttgatctatgcaataagaaccctggttggccaggaaaaaaacgtggccaggataatagcc
aggaatgttaaagatagtgggattggagttagtgccgtgctggttccagagagtttacgt
ggatatatactcgtagagtcatccacaaagattgatctgcaaaacccggcattcaaggtg
ccgcatatgaaaggagccatagaaggagacatcccctatgatgagataaaaagcttttta
aagccggaaccaataatagcttccatacagaagggaagtattgtggaactgatatccgga
ccattcaaaggcgaaaaagccaaagtggttcgtattgatgaatccagagaagatgtagtt
ctggaacttattgaagcagcagttcctatccccgttactgttaaaggtgatcagattaga
ttaatacagaaggaggcagattaa
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