KEGG   Methanobacterium formicicum BRM9: BRM9_1813
Entry
BRM9_1813         CDS       T03396                                 
Name
(GenBank) ribosomal protein L24 family
  KO
K15172  transcription elongation factor SPT5
Organism
mfc  Methanobacterium formicicum BRM9
Brite
KEGG Orthology (KO) [BR:mfc00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    BRM9_1813
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mfc03021]
    BRM9_1813
   03019 Messenger RNA biogenesis [BR:mfc03019]
    BRM9_1813
Transcription machinery [BR:mfc03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     BRM9_1813
  RNA polymerase I system
     BRM9_1813
Messenger RNA biogenesis [BR:mfc03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    DRB sensitivity inducing factor (DSIF) complex
     BRM9_1813
SSDB
Motif
Pfam: Spt5-NGN KOW KOW1_SPT5 DUF411 KOW4_SPT5
Other DBs
NCBI-ProteinID: AIS32621
UniProt: A0A089ZCU1
LinkDB
Position
1857919..1858362
AA seq 147 aa
MIYAIRTLVGQEKNVARIIARNVKDSGIGVSAVLVPESLRGYILVESSTKIDLQNPAFKV
PHMKGAIEGDIPYDEIKSFLKPEPIIASIQKGSIVELISGPFKGEKAKVVRIDESREDVV
LELIEAAVPIPVTVKGDQIRLIQKEAD
NT seq 444 nt   +upstreamnt  +downstreamnt
ttgatctatgcaataagaaccctggttggccaggaaaaaaacgtggccaggataatagcc
aggaatgttaaagatagtgggattggagttagtgccgtgctggttccagagagtttacgt
ggatatatactcgtagagtcatccacaaagattgatctgcaaaacccggcattcaaggtg
ccgcatatgaaaggagccatagaaggagacatcccctatgatgagataaaaagcttttta
aagccggaaccaataatagcttccatacagaagggaagtattgtggaactgatatccgga
ccattcaaaggcgaaaaagccaaagtggttcgtattgatgaatccagagaagatgtagtt
ctggaacttattgaagcagcagttcctatccccgttactgttaaaggtgatcagattaga
ttaatacagaaggaggcagattaa

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