Methanobacterium formicicum BRM9: BRM9_1905
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Entry
BRM9_1905 CDS
T03396
Name
(GenBank) peptide chain release factor aRF1
KO
K03265
peptide chain release factor subunit 1
Organism
mfc
Methanobacterium formicicum BRM9
Pathway
mfc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mfc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
BRM9_1905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfc03019
]
BRM9_1905
03012 Translation factors [BR:
mfc03012
]
BRM9_1905
Messenger RNA biogenesis [BR:
mfc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
BRM9_1905
Translation factors [BR:
mfc03012
]
Eukaryotic type
Release factors
BRM9_1905
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Zn_ribbon_8
eIF-5_eIF-2B
SIR2
PWP3A-B_C
DpnI
DUF3300
Zn_ribbon_SprT
DUF5816
Motif
Other DBs
NCBI-ProteinID:
AIS32709
UniProt:
A0A089ZVM8
LinkDB
All DBs
Position
1953677..1954906
Genome browser
AA seq
409 aa
AA seq
DB search
MSEPSSTELYEVKRTLKELSDKKGRGTELVSVYIPPDKQISDVVKHMREELSQSANIKSK
QTKKNVQSAIEVIMQRMKLFPKPPERGLVLFVGMIPRGGPGTEKMETYVFEPPEPVQTYI
YHCNSQFFLEPLEEILEDKEIYGLAVIDRKEATIAVMKGKRIDIVKNLTSGVPGKHKAGG
QSQRRFDRLIELAAHEFLKRIGEHMNEAFLNLEGIKGVIIGGPGHTKEDFVNGDYLHHEI
KQMIITTVDTSYTGEFGIREVIDKSMDILTEIDIMREKKLVQRFLTELVDENGLASYGEA
EVRQNLINGAVEVLLLSEDIKAKRYTYQCTSCGNQEEKTIKNEKDAKDEPCKNCGDTMKP
TSSEDVIGDFVKMAEEVGSEVEIISTETEEGMQLFRAFGGIAAILRYRI
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaccatcatcaaccgaactttatgaggttaaacgcacactgaaagaactctcc
gataaaaaaggtcggggtactgagctggtgtcagtttacataccaccagataagcagata
agtgacgtggtcaagcacatgcgtgaagagctcagccagagtgccaacattaaaagtaaa
cagaccaaaaagaatgttcagtctgccattgaagttataatgcagcgtatgaagctcttc
cccaagccaccagagaggggtctggtgttatttgtgggtatgatcccccggggagggccg
ggaactgagaagatggagacctatgttttcgaaccaccagaaccagtgcaaacctacatc
taccactgtaactcccagttcttcctggaacccctggaggagatcctggaagataaggag
atctacggactggcagttatcgaccgaaaagaagccaccatagccgtgatgaagggaaaa
cgaatagacattgtcaaaaatttgaccagtggtgttcccgggaagcataaagcaggtgga
cagtcccagagacgttttgaccgattgattgaactggccgcccacgaattcttgaaaagg
atcggggaacatatgaatgaagccttcttaaatcttgaaggcatcaaaggagtaattatc
ggaggacctgggcacactaaggaggattttgtcaacggagattacctgcaccacgagatc
aagcagatgattatcaccaccgtggatacctcctacaccggtgagtttggtatccgggag
gttattgacaaatccatggatatactcaccgaaatcgacatcatgcgggagaaaaagctg
gtccaacgctttttaaccgaactggtggatgaaaatggcctggcatcctacggtgaagcc
gaagtaaggcagaacctgattaacggtgcagtagaagtcctgttactctccgaggatata
aaagctaaaaggtacacctaccagtgcacttcctgtggaaaccaggaagagaaaaccatt
aaaaatgagaaagacgccaaagacgagccctgtaagaattgtggggacaccatgaaaccc
acttcttcagaggatgtaattggggactttgttaaaatggcagaggaagtaggctccgaa
gtggagatcatatccacggaaactgaggagggaatgcagcttttccgtgcctttggaggt
attgctgccatattaaggtacagaatataa
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