Methanobacterium formicicum BRM9: BRM9_1967
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Entry
BRM9_1967 CDS
T03396
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase RfbB
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
mfc
Methanobacterium formicicum BRM9
Pathway
mfc00521
Streptomycin biosynthesis
mfc00523
Polyketide sugar unit biosynthesis
mfc00525
Acarbose and validamycin biosynthesis
mfc00541
Biosynthesis of various nucleotide sugars
mfc01100
Metabolic pathways
mfc01110
Biosynthesis of secondary metabolites
mfc01250
Biosynthesis of nucleotide sugars
Module
mfc_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
mfc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
BRM9_1967 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
BRM9_1967 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
BRM9_1967 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
BRM9_1967 (rfbB)
00525 Acarbose and validamycin biosynthesis
BRM9_1967 (rfbB)
Enzymes [BR:
mfc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
BRM9_1967 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
NAD_binding_10
Sacchrp_dh_NADP
adh_short
NmrA
KR
Ldh_1_N
DapB_N
Slo-like_RCK
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
AIS32771
UniProt:
A0A090I672
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All DBs
Position
complement(2016707..2017642)
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AA seq
311 aa
AA seq
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MKIMITGGAGFIGSNFVHHLCESEDYEVLVLDKLTYAGDMENLKEVRDKIEFVKGDIADE
ELVSKIMKDCDMVVNFAAETHVDRSIEDPGVFVKTDVIGTYNLLENVRKYDVERYLQIST
DEVYGSIESGSFTEENNLDPSSPYSASKAGGDLLVGAYWRTYNTPIIITRSSNNFGPRQY
PEKLIPLFIMNAMQDKSLPVYGDGKNVRDWIYVMDNCQGIETALLKGKLGEVYNIGGGNE
KNNLEITHLILELVNKPESLITFVEDRLGHDRRYSLDSTKTRKLGWKPQFSFEEALKETV
EWYKENYSRYL
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgaagataatgattaccggtggtgcaggattcattggatccaacttcgtacaccaccta
tgtgagagtgaggactacgaggtcctggtcctggacaagttaacctatgccggggatatg
gagaacctgaaggaagttcgtgacaaaattgaattcgttaaaggggacatagccgacgag
gaactggtctccaagataatgaaagactgtgacatggtggttaactttgcagccgagacc
catgtggaccgttccatcgaggatcccggagtattcgttaaaaccgatgttataggaact
tacaacctcctggaaaatgtccgtaagtacgatgtggaacgctacctgcagatatccacc
gatgaagtctacggtagcatagagtcagggtcatttactgaagaaaataacctggacccc
tccagtccctactccgccagtaaagctggtggagaccttctggtaggggcttactggagg
acctacaacacccccataatcatcacccggagcagtaacaacttcggaccccgccagtac
ccggaaaagctgatacctctattcataatgaacgccatgcaggataaatccctaccagtt
tatggtgatggtaaaaacgtccgggactggatatacgtcatggacaactgtcagggaata
gaaactgccctccttaagggtaaactgggagaagtttacaatatcggtggtggaaacgag
aaaaacaatctggaaataacccacctcatactggaacttgtgaataaaccagaaagcctc
atcaccttcgtggaagaccggctgggtcatgaccggcgttactccctggactctaccaag
actagaaaattaggatggaagccccagttctcatttgaagaggccttaaaagaaacagtg
gaatggtataaagagaactattcccgttacctctaa
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