Methanobacterium formicicum BRM9: BRM9_2071
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Entry
BRM9_2071 CDS
T03396
Symbol
rpoA1
Name
(GenBank) DNA-directed RNA polymerase subunit A' RpoA1
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
mfc
Methanobacterium formicicum BRM9
Pathway
mfc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mfc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BRM9_2071 (rpoA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mfc03021
]
BRM9_2071 (rpoA1)
Enzymes [BR:
mfc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BRM9_2071 (rpoA1)
Transcription machinery [BR:
mfc03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
BRM9_2071 (rpoA1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
USP7_ICP0_bdg
AtMg01350
Motif
Other DBs
NCBI-ProteinID:
AIS32873
UniProt:
A0A090I9E0
LinkDB
All DBs
Position
complement(2125107..2127722)
Genome browser
AA seq
871 aa
AA seq
DB search
MKGILKKIAQINFGLLSPENIRRMSVTKIVTPDTYDEDGYPIEAGLMDPRLGVIDPGLRC
RSCGSKGGDCQGHFGHINLARPVVHVGFADTIHKILRSTCSECGKVLLTETERIDYQDRI
ESRLRNEESITGLVKDVYATARRDKCPHCDTEQEDVKIDKPVSIVEGNYKLTPSEVRERL
EKIPEEDYIFLGINSKVARPEWMVLTVLPVPPVTVRPSITLETGERSEDDLTHKLVDILR
INQRLKENMEAGAPQLIVEDLWELLQYHVTTYFDNEASGVPPARHRSGRPLKTLAQRLKG
KEGRFRSNLSGKRVNFSARTVISPDPNISINNVGVPEMIATEVTVPIYVTDWNREEMQKY
ILNGPKVHPGANYVIRPDGRKIRVYDETKEAIVEKLEPGFVVERHLMDGDIVLFNRQPSL
HRMSMMAHEVKVLPYKTFRLNLCVCPPYNADFDGDEMNMHVFQTEESRAEAKSLMRVQEH
ILSPRFGGPIIGGIHDHISGAYLLTREGSNFREDDVFQMLKKSQLPIPKPRNREWSGKEI
YSLLLPKDLNMVYKAEICRKCDECLKQECRNDAYVVIENGELKSGAIDEKAYGAFAGKIL
DSIVKEYGTDRAREFLDSATKLAISGIMKRGFTTSTADEEIPQEAKDRIEELLRKAEEKV
EMLIAAYHADELEALPGRSLRETLEMKIMQVLGEARDKSGEIAESYFGMDNHAVIMALTG
ARGSMLNLTQIAACVGQQSVRGGRIERGYSKRTLPHFQEGELGAKASGFVHSSYKAGLDP
LEFFFHAMGGREGLVDTAIRTAQSGYMQRRLVNALQDLSVNTDKTVRDNRGVVIQTYYGE
DGIDPAKSDYGKVADIDRLIEEMRIKAKAGK
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaggaattttaaagaagatcgcccagatcaactttggcctgctatcgccggagaac
atccggagaatgtccgtcaccaaaatcgtgaccccggatacctacgatgaagatggatac
cccatagaagcgggtctaatggacccccgattgggagtcatcgacccaggactaagatgt
cgatcatgcggttctaaaggaggagactgtcagggacacttcggtcacataaacctggcc
cgaccagtagtccacgtgggattcgcagacaccatacacaaaatcctgcgttcaacctgc
agtgaatgtggaaaggtgcttttaactgaaactgaaagaatagactaccaagacagaatt
gagtcccgattacgaaacgaagaaagcatcaccggactggtaaaggacgtatacgccacc
gcacgtcgggataaatgtccccactgtgacacggaacaggaagatgtcaagattgataaa
ccagtatccatagttgaaggtaactacaaattaacccccagtgaagtccgtgaacgcctg
gaaaaaatcccggaagaagattacatattcctgggaatcaactccaaggtagcccgacca
gaatggatggtgctgacggttctacctgtaccaccggtcaccgtgcgcccttccataacc
ctggaaaccggtgaaagatccgaggatgacctgacccacaaactggtggacatcctgcgt
atcaaccagcgcctcaaggagaacatggaggccggagcaccacaactcattgtggaggat
ctatgggaattactacagtatcacgtcaccacctactttgataatgaagcttcaggagtg
cctccagcccggcaccgatccggaagaccactcaagactctggcccaacgtttaaaaggt
aaggaaggacgtttccgaagtaacctctcaggtaaaagggttaacttctctgccaggaca
gttatctccccggaccccaacatcagtatcaacaacgtaggggtgccggagatgattgcc
acggaggttacggtacctatctacgtcactgactggaaccgggaggagatgcagaagtac
atcctcaacggacctaaagtacaccccggtgcaaattatgttattcggcccgatggccga
aagatcagggtctacgacgaaaccaaggaagccatcgtcgaaaaactggaacccggattc
gtggtggaaagacacctcatggatggagatatcgtactcttcaaccgacaaccatcactc
caccgtatgtccatgatggcccacgaggtaaaggtcctgccctataaaactttcagactc
aacctctgtgtatgtccaccatacaacgcagatttcgacggggacgaaatgaacatgcac
gtcttccagacagaagaatcacgtgctgaagctaaatcccttatgcgggttcaggaacac
atcttatctcctcgtttcggaggaccaattattggtggtattcacgatcacatatccggt
gcctacctcctcaccagggaaggatctaacttccgagaggatgatgtcttccagatgctt
aaaaaatcacagttacccatacccaaaccaagaaacagggaatggagtggtaaagagata
tacagtctgctactacccaaagaccttaacatggtttacaaagcagaaatctgccgtaaa
tgtgatgaatgcctgaaacaggaatgtcgaaacgatgcctacgtggttatagaaaatggg
gaactcaaatcaggagccatagatgaaaaagcatacggtgcctttgccggtaagatactg
gactctattgttaaggagtacggaactgaccgggcccgagaattcctggattcagccacc
aaactggccatctctggtattatgaaaaggggattcaccaccagtacagctgatgaagag
ataccccaggaagccaaggaccgtattgaagaactccttcgtaaggcagaagaaaaggta
gaaatgctcattgccgcataccatgccgatgaactggaagcactgccgggacgtagcctc
cgggaaaccctggagatgaagatcatgcaggttctaggtgaagccagggataaatcaggg
gaaatagcagaaagctactttggaatggataaccatgcagttatcatggccttaaccggg
gctcgtggttccatgctgaacctgacccagatcgccgcctgtgtggggcagcaatctgta
cgtgggggccgtattgaaaggggttacagtaaaagaaccctacctcatttccaggaaggt
gaactgggtgcaaaggccagtggattcgtccactccagttacaaggctggtctcgaccca
ctggaatttttcttccacgctatgggaggacgtgaaggactggtggataccgctatccgt
accgcccagagtggttacatgcaacgccgactggtgaatgctctgcaggatctatcagtc
aacactgacaaaactgtacgtgacaaccggggagtggttatccagacttactacggtgaa
gatggaatcgacccggccaagagtgactacggaaaggtagctgacattgaccgtttgata
gaagaaatgagaataaaagccaaagcaggcaaataa
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