Methanobacterium formicicum BRM9: BRM9_2296
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Entry
BRM9_2296 CDS
T03396
Name
(GenBank) replication factor A
KO
K07466
replication factor A1
Organism
mfc
Methanobacterium formicicum BRM9
Pathway
mfc03030
DNA replication
mfc03420
Nucleotide excision repair
mfc03430
Mismatch repair
mfc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mfc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BRM9_2296
03420 Nucleotide excision repair
BRM9_2296
03430 Mismatch repair
BRM9_2296
03440 Homologous recombination
BRM9_2296
03460 Fanconi anemia pathway
BRM9_2296
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mfc03000
]
BRM9_2296
03032 DNA replication proteins [BR:
mfc03032
]
BRM9_2296
03400 DNA repair and recombination proteins [BR:
mfc03400
]
BRM9_2296
Transcription factors [BR:
mfc03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
BRM9_2296
DNA replication proteins [BR:
mfc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
BRM9_2296
DNA repair and recombination proteins [BR:
mfc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
BRM9_2296
MMR (mismatch excision repair)
BRM9_2296
DSBR (double strand breaks repair)
HR (homologous recombination)
BRM9_2296
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
CDC24_OB3
Rep_fac-A_C
Ssb-like_OB
SHLD2_OB1
POT1PC
DUF5088
RecG_wedge
OB_MEIOB_N
DUF3127
Zn_ribbon_6
DZR_2
Motif
Other DBs
NCBI-ProteinID:
AIS33096
UniProt:
A0A089ZE74
LinkDB
All DBs
Position
2336717..2339092
Genome browser
AA seq
791 aa
AA seq
DB search
MREISQEIKDEYGKIKDKISYEEFLKKMEEYKEENADVSFIDDISIAQMVVGNYITEKNE
PTEEVKDFWKVADLETGTQHINLLGRVMSISNVKKFTSKKGREGKLANLILADETGRIRV
VFWTENIKLLDKIQEGDVVQINDVEVKQGFREDETHLNLHSSLEKLDPKEYPDLPPYNDK
ITPLNEVKGDEEVNVVGRITRVPRIRTFDRNGRDGKVASLELQDKSGTMQLTLWNKDTQI
IEDLELAEGDAIKVVGAQSRVRNGEVSLNHSWIGRIVKGDFEVPEYQENILKIGDAHEIR
NVTLLGLVSKVYDTITFERDDGTTGKVKSLELEDDTGPIRVTLWNDDTDLDVKKMDLLKI
IGGNIEFDDYSGTNYRVNTNWNSKLIVNPPIDNDLKVLLNEVGKYLKPVKIGDLNNIEED
GEEVDVVGRVVNLYEPNEFQRDDGSMGMVRTIEIADDTGMVRVSLWDNKAEHPMKEGDAI
KIENARSRLGDYQVDLSVGRTSRMVAPSEEEIKALPSLKDVESMIYQTKKIQELAEGDRD
VSLSGRILSIGEPTQFTKSDGSSGLVRSIEIADESGVVRASLWDDQANAPLKEGEAIKIE
NPRVTLRNDNIELSVGRTTLINKISDEEASVPSLEEIEGKLYPSKKIEDIEEGDQNIKVT
GEVVDIRGNKILFEMCPNCNKRVNWVDNAYICDICGEEIKKPNMLMIIGLLLEDDTGTIS
ITFFRKAAEEVLGMTTSEAEEIIATTGDEGSLEEKVGDLVGQQITVIADASFDEYNEEVR
LNARKTLDIKL
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgagggaaattagccaagagataaaggacgaatatgggaaaattaaggacaaaatctca
tatgaagaattcctaaaaaagatggaagaatataaggaagaaaatgcggatgtaagtttt
attgacgatattagcatagcccagatggtagtagggaactacattaccgaaaaaaatgaa
cctaccgaagaagtaaaggacttctggaaagttgcggatttagaaaccggcacccaacac
ataaacctactggggcgagtaatgagtatttccaatgttaaaaaattcaccagcaaaaaa
ggaagagaaggaaaactggcaaatttaatcctggccgatgaaaccgggagaataagagtg
gtcttttggactgaaaacatcaaattgctggataaaatccaggaaggagatgtggtccag
atcaatgatgtggaagtaaaacagggattccgtgaggatgaaacccacctcaacctacat
tcttccctggaaaagttggatccaaaagaatatcctgatttacccccatacaacgataaa
ataacccctttaaacgaagttaaaggagatgaagaggttaacgtggtgggccgtatcacc
cgagttccccggataagaacctttgaccgcaatgggagagatggtaaagtagcctcactg
gaactgcaggataagagtggcaccatgcagttaaccctgtggaacaaggacacccagatc
atcgaagatctggaactggctgaaggagacgccattaaagtagtgggggctcaaagcaga
gttcgcaatggagaagtatccttaaaccactcctggattggcagaatagtcaaaggagac
tttgaagtccccgaatatcaggaaaatattctcaaaataggtgatgcccacgaaataagg
aatgtcacccttttaggactggttagcaaagtttacgacactataaccttcgaacgagac
gatggaaccaccgggaaggtgaagtcactggagttggaagatgatactggccccatacgg
gttaccctatggaacgatgacactgacctggatgtgaagaagatggacctcctgaaaatc
atcggaggaaacattgaatttgatgattattctggcaccaactaccgggtaaacaccaac
tggaacagcaaactaatagtcaacccccccattgacaatgatttaaaggttctcctgaat
gaagtgggtaaatacctgaaaccagtgaaaattggtgatttaaacaacatagaagaagat
ggagaagaagtggatgttgttggacgagtagtaaacctttatgaacctaacgagtttcag
cgagacgacggtagcatgggaatggtgagaactattgaaattgccgatgataccggaatg
gtgagagtttccctgtgggataacaaagcagaacaccctatgaaagagggagatgccatt
aaaatcgagaatgcccgtagccgtctgggggattaccaagtagacctcagtgtgggtcgg
acctcccgaatggttgccccctccgaagaggagatcaaagcacttccctctcttaaggat
gtggaatcaatgatctaccagaccaaaaagatccaggaactggcagaaggtgaccgtgat
gtgagcctctccggccggattttaagcataggagaacctacacaattcaccaaaagtgat
ggtagctctggtttagtacgttccatagagatagccgatgaaagtggagttgtacgagca
tctctctgggatgaccaagccaatgcacccctcaaagaaggagaagccattaaaattgaa
aacccccgagttaccctgagaaacgataacatagaacttagtgtgggtcgaacaaccctt
ataaacaaaatcagcgatgaagaagcctcagtacccagcctagaggagatagaaggaaaa
ttatacccttctaaaaagattgaagatattgaagaaggggaccagaacatcaaagtaacc
ggggaagtggtggatatccgcggtaacaaaatactctttgagatgtgccctaactgtaat
aaaagagttaactgggttgataatgcttatatctgtgacatatgtggagaagaaattaaa
aaacccaatatgttaatgatcatcggtttattgctggaagatgacactggaaccataagt
atcacctttttccgtaaggccgctgaggaagtcctgggcatgaccacctctgaagccgaa
gaaatcattgccaccacgggagatgaaggatcactagaggaaaaggtgggtgatctggtg
ggccagcaaatcacggtgatcgccgatgccagcttcgatgaatacaatgaggaagtgcgt
ttaaacgccaggaaaacactggatattaaactttaa
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