Mycoplasmoides fastidiosum: NPA10_04255
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Entry
NPA10_04255 CDS
T08471
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
mfd
Mycoplasmoides fastidiosum
Pathway
mfd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mfd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NPA10_04255 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfd03400
]
NPA10_04255 (uvrB)
DNA repair and recombination proteins [BR:
mfd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NPA10_04255 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NPA10_04255 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_7
AAA_22
AAA_30
Cas3-like_C_2
Helicase_C_2
AAA_16
AAA_19
AAA_25
PIF1
AAA
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
UUD37748
LinkDB
All DBs
Position
1191181..1193187
Genome browser
AA seq
668 aa
AA seq
DB search
MNFLGFNLKSSKTPKGDQPKAIEALVKAVNAKKRSSVLLGATGTGKTFTIANVISKVQKP
TLVIAHNKTLAGQLYNDLKSTFPDNRVEYYISYFDYYQPEAYIPSTDTFIEKSSVTNSII
EMMRLSTLTALTTRKDVIVVASVASIYPASPPEDFANFRFVLELNDPNLTIKKVINKLVQ
LNYEANDIQLTAGKFSLKGDVLKIMLGYTDQFILRVSFFGDVIEEIAEIDPLNNTIIQKH
KNYLITPANEYLLEVSRRDEAIRRIEAELKKVAANFAKQNKYLEEQRIVQRTNHDLDFLK
EMGFCVGIENYSAHLELREDGQTPYSLFDYFGDDWLLIIDESHITIPQIRGMFNTDKSRK
TTLVQHGFRLPSALNNRPLNFEEFQSKTKQVIYVSATPNEWEIQEANNEIVEQIVRPTGL
IDPVIEVRPSVGQVDDLVAELKIQIEKKHRTLVTVLTIKMAEELTEYLKQQKIKVAYLHN
ELKTLERDHILNSLRMGVYDVVVGINLLREGLDLPEVSLVVIFDANKPGFFRSEKSLIQI
IGRAARNTEGRVIMYADTISTQMEQAIKETNRRRDIQINYNKAHNIVPTTIIKPIHSDLS
SNFSGTDLDLTIKRSRDKKQTEETIKTLQEQMLEAANNQEYERAAYLRDAIIELQMAAKP
KRQKNKIK
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
ttgaattttcttggatttaatttaaaaagttccaaaactccaaaaggtgatcaacccaaa
gcaatcgaagctttggttaaagctgttaatgccaaaaaaagaagtagtgttttattaggt
gcaactgggaccggaaaaactttcactattgctaatgttatttctaaagtgcaaaaacca
actttagtgattgcgcataataaaacactagcaggacaattatataatgatttaaaatca
acttttcctgataaccgtgttgaatattacatctcttattttgattattatcaacctgaa
gcctatattccaagtactgatactttcattgaaaaatcatcagtaactaacagtattatt
gaaatgatgcggctatcaaccttaactgcattaacaacccgtaaagacgtaattgttgtt
gcttcagtagcttcaatttatcccgcatcaccacctgaagattttgctaactttcggttt
gttttagaattaaatgatccgaatttaacaattaaaaaagtgatcaataagttagtacaa
ctaaactatgaagccaatgatattcagttaaccgctggtaagtttagtcttaagggtgat
gtattaaaaatcatgttaggttacactgatcagttcattctaagggtttctttttttggt
gatgtcattgaagaaattgctgaaattgatccgttaaataatactattattcaaaaacat
aaaaactatttgattactcctgctaatgaatacttattagaagttagtcgccgtgatgaa
gccattcgtcgaattgaagccgaactaaaaaaagttgcagctaattttgctaaacaaaat
aaatatctagaagaacaacgcattgttcaacgtaccaatcatgatctagattttctaaaa
gaaatgggtttttgtgttggcattgaaaattattctgctcacttggaattacgtgaagat
ggtcaaacaccttatagtctatttgactactttggtgatgattgattattaatcatcgat
gagtctcatattaccattccccaaattcggggaatgttcaacactgataaatcccgcaaa
actacattggttcaacacggatttcgcttaccttcagctttgaataatcgtcctttaaat
tttgaagaatttcaatctaaaactaaacaagtgatttatgtttcagctactcctaatgaa
tgagaaattcaggaagctaataatgagattgttgagcaaattgttcgtccaactggttta
attgatccagtaattgaagtacgaccttctgttgggcaagttgatgatttagttgctgaa
ctaaaaattcagattgaaaaaaaacatcgaactttagtaaccgttttaacaattaaaatg
gctgaagaattaactgaatatttaaagcaacaaaaaattaaagttgcttatttgcacaat
gaattaaaaactttagaacgtgatcacattttaaattctttacgaatgggagtttatgat
gtagttgttggcattaatttattacgtgaaggtttagacttacccgaagtttccttagtt
gtaatttttgatgctaataagcccggctttttccgtagcgaaaaatctttaattcaaatt
atcggtcgagcagcacgcaacaccgaaggaagggtgattatgtatgcagatacaatctca
acccaaatggagcaagccattaaagaaactaatcgtcggcgcgatattcaaattaattat
aataaagctcacaatattgtgccaacaacaattattaaaccaattcacagcgacttatct
agcaacttttcaggaactgatttagatttaacaatcaaacgctctcgcgataaaaaacaa
actgaagaaacaatcaaaacattgcaagagcaaatgttagaagctgctaataatcaagaa
tatgagcgagctgcatatttacgtgatgcaatcattgagttacaaatggcagctaaacca
aaaagacaaaagaacaaaataaaataa
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