Methanocaldococcus fervens: Mefer_0124
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Entry
Mefer_0124 CDS
T00976
Name
(GenBank) DNA topoisomerase VI, B subunit
KO
K03167
DNA topoisomerase VI subunit B [EC:
5.6.2.2
]
Organism
mfe
Methanocaldococcus fervens
Brite
KEGG Orthology (KO) [BR:
mfe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mfe03032
]
Mefer_0124
Enzymes [BR:
mfe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Mefer_0124
DNA replication proteins [BR:
mfe03032
]
Prokaryotic type
DNA Topoisomerases
Mefer_0124
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Topo-VIb_trans
HATPase_c
HATPase_c_3
CTD10
Costars
Med29
XPA_C
Motif
Other DBs
NCBI-ProteinID:
ACV23966
UniProt:
C7P5Y4
LinkDB
All DBs
Position
complement(115785..117755)
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AA seq
656 aa
AA seq
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MSEDLFKEFKEHSVAEFFRKNKHMLGYSGKIRSLTTIIHELVTNSLDACEEAGILPDIKV
EIEKLGADHYKVAVEDNGPGIPLEFIPKVFGKMLAGSKMHRFIQSRGQQGIGAAGVLLFS
QITTGKPLKITTSTGDGNIYEVEVKMNVEKNEGEIVSKKVRKGKWRGTRVEGEFKEVSYN
RGEFGPFEYLRRISLATPHAKILLKDPYGDVLFDRVVDELPKKPEEMKPHPYGLTTDELL
YIARKTNSKKVSSMLVSELSRVTTKRIKELSTYLLRDLILKKFKDSVFWNMVVSCYLNMD
IESYLNKFKDYISDDEIETVKTIIKNLPESLDDLKRYALKYLTIEYLFNKLSEEEINKLK
NHFKKIPENFMEWAEKNYLSATVVDELNKKVKNIVKSPDEFIAEIKNKGLISDEELKRFE
DEVKKILNKNPKELTWDEAEMIVNCLQSMEFMAPPTTGLRPIGAENIEKSLKELLQPDFV
KAITRNPKTYKGGIPFAVEVAIAYGGNAGRQSDEGRRMEIMRFANHVPLLYDASACGLTR
AVKSINWRRYGLRGEDAPITVFVNLISTFIPYTSAGKQAVACSENENEEIFNEIRHALMI
CGRELEKYLSRIRREAEEEKKRKYVMKYARIFAEALANILNKPVDEIEERVVKLLE
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagatttatttaaagaatttaaagagcactcagttgctgaattttttaggaaa
aataaacacatgcttggatacagtggaaagattaggagcctaacaacaataattcacgaa
ttggttacaaacagcttagatgcatgtgaagaagctggcattttaccagatataaaagtt
gagattgagaagttgggagctgaccattacaaagttgcagttgaagataacggtccagga
attccattagaatttattccaaaagtatttgggaagatgttagccggttctaagatgcat
agatttatacaatcaagaggacagcaggggattggagctgcaggtgtcttattattctca
caaataactacgggaaagccattgaagatcacaacatctactggagatggcaatatctac
gaagttgaagtaaagatgaatgttgaaaaaaatgaaggggaaattgtatcaaaaaaagtt
agaaaaggaaaatggagaggaacaagagtagaaggagaatttaaagaagttagctacaat
agaggagagtttggaccttttgaatacttaagaaggataagtttagcaacaccacatgca
aagattttattaaaagacccctatggagatgttttatttgatagagttgttgatgaacta
ccaaaaaaaccagaagaaatgaaacctcacccttatggtttaactacagatgaacttttg
tatattgcaagaaaaacaaactcaaagaaagtttcttcaatgctcgtttctgaactttca
agggttacaacaaaaagaattaaagagctctctacctatttgctaagagacttaatattg
aaaaaattcaaagatagcgtattttggaatatggttgtttcctgctatttaaatatggat
attgaaagctatctaaataagtttaaagattacatcagtgatgatgaaatagaaaccgtt
aaaactataattaaaaaccttccagagagcttagatgatttaaagagatacgctttaaaa
tacttaacaatagagtatttgtttaataagctaagcgaggaagagataaacaaattaaag
aaccactttaaaaagatacctgaaaacttcatggaatgggctgagaagaattatttatca
gctacagttgttgatgaattgaataaaaaagttaaaaacatagtaaaaagtccagatgag
tttattgctgaaataaaaaataaagggctaatatcagatgaagaactgaaaagatttgaa
gatgaagttaaaaaaatcttaaataaaaatcctaaagagctaacctgggatgaagcagag
atgattgttaattgcctccaaagcatggagtttatggctccacctacaacagggttaaga
cctattggagctgaaaatatagaaaaatcattaaaagaacttttacagccagatttcgtt
aaggcaattacaagaaatccaaagacttacaaaggaggaatcccatttgccgttgaagtt
gccatcgcttatggaggaaatgcaggaaggcagagtgatgaaggaagaagaatggaaata
atgagatttgcaaaccacgttcctttattgtatgatgcttcagcatgtggattgacaaga
gcagttaagagtataaattggagaaggtatgggctgagaggagaggatgctccaataacg
gtatttgttaatttaatatccacatttataccttacacttcggcaggaaaacaggcagtt
gcatgcagtgaaaatgaaaatgaagagatttttaatgagataaggcatgcgttaatgatt
tgtggtagggagttggaaaagtatctatcaagaattagaagagaggcggaggaggagaaa
aagaggaagtatgttatgaagtatgcaaggatatttgccgaggcattggctaatatattg
aataagccagttgatgagattgaggagagggttgttaaattgttagaataa
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