Methanocaldococcus fervens: Mefer_0205
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Entry
Mefer_0205 CDS
T00976
Name
(GenBank) rRNA pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mfe
Methanocaldococcus fervens
Brite
KEGG Orthology (KO) [BR:
mfe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mfe03016
]
Mefer_0205
Enzymes [BR:
mfe01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Mefer_0205
Transfer RNA biogenesis [BR:
mfe03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Mefer_0205
Prokaryotic type
Mefer_0205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_C_2
TruB_N
DKCLD
PUA
Pus10_C
UPF0113
GIDA
Motif
Other DBs
NCBI-ProteinID:
ACV24044
UniProt:
C7P662
LinkDB
All DBs
Position
201538..202524
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AA seq
328 aa
AA seq
DB search
MEKKVKNEELIVKEEAETNWDYGCNPYERKIEDLIKYGVVVIDKPRGPTSHEVSSWVKKI
LNLDKAGHGGTLDPKVTGVLPVALERATKTIPMWHIPPKEYICLMHLHRDASEEDILRIF
KEFTGRIYQRPPLKAAVKRRLRIRKIYELELLDLEGRDVLFRVKCQSGTYIRKLCEDIGE
ALGTSAHMQELRRVKSGCFEEKDAVYLQDLLDAYIFWKEDGDEEELRRIIKPMEYGLRHL
KKVVVKDSAVDAICHGADVYVRGIAKLSKGIGKGEIVLIETLKGEAVGVGKALMNTKEIL
NSDKGIAVDVERVYMDRGTYPRMWKKKK
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaaaaaggtaaaaaatgaggagcttatagttaaggaagaagctgaaacaaactgg
gattatggttgcaacccttacgaaagaaaaatagaggatttaataaaatacggtgttgtc
gttattgataagccgagaggccctacatctcatgaggtatcatcatgggttaaaaaaatc
ttaaatttggataaagctggacatggggggacattagaccctaaagttacaggggttttg
ccagtagctttagagagagctacaaaaacaatacctatgtggcacatccctcctaaagaa
tacatctgcttaatgcatcttcatagagacgcttctgaagaagatatattgagaattttt
aaagaattcactggaagaatttatcaaagacctccattaaaggcagctgttaaaagaaga
ttaagaattagaaaaatttatgagttagaattattggatttggaaggtagagatgtttta
tttagggttaaatgccaatctggaacttatataagaaaactttgtgaagacataggagag
gcattagggacatctgcccatatgcaggagctaagaagggttaaaagtggatgctttgaa
gagaaggatgccgtttatcttcaggatttgttagacgcttatatattttggaaagaagat
ggggatgaagaagagctgagaaggatcataaaaccaatggaatatggattgaggcattta
aagaaggttgttgttaaagactctgctgttgatgctatttgccatggagcggatgtttat
gttagagggatagcaaaattaagtaagggtattggtaagggagagatagttttaattgag
acattaaaaggagaggcagttggagtaggaaaggcgttaatgaatacaaaagagatatta
aattctgataaagggattgccgttgatgttgagagggtttatatggataggggaacatat
ccaagaatgtggaagaagaagaaataa
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