KEGG   Methanocaldococcus fervens: Mefer_0354
Entry
Mefer_0354        CDS       T00976                                 
Name
(GenBank) GTP-binding signal recognition particle SRP54 G-domain protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
mfe  Methanocaldococcus fervens
Pathway
mfe02024  Quorum sensing
mfe03060  Protein export
mfe03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:mfe00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    Mefer_0354
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Mefer_0354
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Mefer_0354
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:mfe02044]
    Mefer_0354
Enzymes [BR:mfe01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     Mefer_0354
Secretion system [BR:mfe02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   Mefer_0354
  Eukaryotic Sec-SRP protein
   Mefer_0354
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N AAA_22 CbiA Zeta_toxin nSTAND3 cobW AAA_17 AAA_30 AAA_19 6PF2K NPHP3_N CLP1_P ResIII AAA_16 SLFN-g3_helicase AAA_33 APS_kinase AAA_24 SWI2_SNF2 AAA_18 MT0933_antitox SRPRB MobB KTI12 MMR_HSR1 KduI LpxK TsaE NACHT AAA_5 MeaB PPV_E1_C ParA nSTAND_NTPase7 ATP_bind_1 AAA_14 AAA Thymidylate_kin TrwB_AAD_bind AAA_7 AAA_31 RNA_helicase G-alpha AAA_28 ABC_tran DO-GTPase2 NTPase_1
Other DBs
NCBI-ProteinID: ACV24189
UniProt: C7P6K7
LinkDB
Position
343617..344972
AA seq 451 aa
MLDKLGENLNKALNKLKAAAFVDKKLIKEVIKDIQRALIQADVNVKLVLKMSKEIERRAL
KEETPKGLSKKEHIIKIVYEELVKLLGEEAKKLELSPKKQNVILLVGIQGSGKTTTAAKL
ARYIQKRGLKPALIAADTYRPAAYEQLKQLAEKIHVPLYGDETKTKSPVEIVKEGMEKFK
KADVLIIDTAGRHKEERGLLEEMKQIKEVTNPDEIILVIDGTIGQQAGIQAKAFKEAVGE
IGSIIVTKLDGSAKGGGALSAVAETGAPIKFIGIGEGIDDLEPFDPKKFISRLLGMGDLD
SLLEKAEDMVDEKTEESIDAIMKGKFTLNELLTQLEAIENMGSMKKILSMIPGFGGAMPK
ELSNLTEAKIKKYKVIISSMTKEERENPKIIKASRIRRIARGSGTTENEVREVLKYYETT
KNAIDKLRKGKMLRIGGPLGQILRQLMYKEM
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgctcgacaagttaggagaaaacctaaataaagctttaaataaactaaaagctgctgca
tttgtcgataaaaaattaataaaggaagttattaaagatattcaaagagctttaattcaa
gctgatgttaatgtaaaattggttctgaagatgagtaaggaaatagaaagaagagcttta
aaagaggagactccaaaagggttgtcaaagaaagaacatattataaaaattgtttatgaa
gaattggttaaattgttaggagaggaagcaaaaaaattagagctaagtccaaaaaaacag
aatgttattttactggttgggattcaaggttctggaaaaaccacaacagcagcaaaatta
gcaagatatatacaaaagagggggttaaaacctgctttaattgctgctgatacgtataga
cctgctgcttatgagcagttgaagcaattggctgaaaaaatccacgtgccattatatggt
gatgaaacaaaaacaaaatcacctgtagagattgttaaagaaggaatggagaaatttaag
aaggcagacgttctaattatagacactgctggaaggcataaggaggaaagaggtttattg
gaagagatgaagcaaattaaagaggtaacaaaccctgatgaaattattttggttattgat
ggaactattgggcaacaggctggtatacaagccaaggcatttaaagaggcggttggagag
attggaagtattatagtcacaaagttagatggttccgctaaaggaggaggggctttaagt
gcagtagccgagacaggagcacctataaagtttattggtattggtgaagggatagatgat
ttagagccattcgaccctaaaaagtttatatctcgattattgggaatgggagatttagat
agtttgttagaaaaagctgaggatatggttgatgaaaagactgaagagagtatagatgcg
ataatgaaaggtaagttcacattgaatgagctattaactcaattagaggcaattgaaaac
atgggttcaatgaaaaaaatcttaagcatgattcctggatttgggggagctatgcctaaa
gaactctctaatttaactgaagcaaaaataaagaaatataaagtaattataagctcaatg
actaaagaagagagggaaaatccaaagattattaaagcatcaagaataagaaggatagca
agaggttctggaactacagaaaatgaagttagagaggttttaaaatattatgaaactacg
aaaaatgctatagataagcttaggaagggtaaaatgctaagaattggtgggccgttgggg
cagatattaaggcagttaatgtataaggaaatgtaa

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