KEGG   Methanocaldococcus fervens: Mefer_0432
Entry
Mefer_0432        CDS       T00976                                 
Name
(GenBank) proliferating cell nuclear antigen PcnA
  KO
K04802  proliferating cell nuclear antigen
Organism
mfe  Methanocaldococcus fervens
Pathway
mfe03030  DNA replication
mfe03410  Base excision repair
mfe03420  Nucleotide excision repair
mfe03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mfe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Mefer_0432
   03410 Base excision repair
    Mefer_0432
   03420 Nucleotide excision repair
    Mefer_0432
   03430 Mismatch repair
    Mefer_0432
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mfe03032]
    Mefer_0432
   03400 DNA repair and recombination proteins [BR:mfe03400]
    Mefer_0432
DNA replication proteins [BR:mfe03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    Mefer_0432
DNA repair and recombination proteins [BR:mfe03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     Mefer_0432
   MMR (mismatch excision repair)
    Other MMR factors
     Mefer_0432
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    Mefer_0432
SSDB
Motif
Pfam: PCNA_N PCNA_C Rad1 Rad9 DNA_pol3_beta_3 FAIM1 DUF8275
Other DBs
NCBI-ProteinID: ACV24258
UniProt: C7P6S6
LinkDB
Position
complement(415761..416489)
AA seq 242 aa
MESAKEFKKVIDTVSTLLDEICFEVDEEGVRASAMDPSHVALVSLEIPRLAFEEYEADNH
EIGIDLEAFKKVMNRAKSKDRLILELDEEKNKLNVIFENTGKRKFSLALLDLSASSVKVP
EIEYPNVIMIKGDAFKEALKDADLFSDYVILKVDEEKFVVHAKGDLNDFNAEFEKDSSAI
ISLDVKEEAKSAFNLDYLKDMVKGVSSGDIIKIYLGNDMPVKIEYTLAGVNLTFLLAPRI
EG
NT seq 729 nt   +upstreamnt  +downstreamnt
atggagagtgcaaaagagtttaaaaaggttattgatactgtatcaacacttttggatgag
atttgttttgaagttgatgaagagggggttagagcaagcgcaatggatccaagccacgtg
gcattagttagcttagaaattccaagattggcgtttgaagagtatgaagcggataatcat
gaaattggaattgatttagaagcgtttaaaaaagttatgaatagggctaaatcaaaagat
aggttaattttagaattggatgaggagaaaaataagttaaacgttatatttgaaaatact
ggaaagaggaagtttagcttagcattgttggatttatctgcctcatcagttaaagttcct
gagattgagtatcctaatgttataatgattaaaggggatgctttcaaagaggctttaaag
gatgctgatttattcagcgattatgtaattttgaaggttgatgaggaaaagtttgttgtt
catgctaagggggacttgaatgattttaatgcagagtttgaaaaagatagttctgcaatt
attagcttggatgtcaaagaagaggctaaaagtgctttcaatttagattatttaaaggat
atggttaagggggttagttctggggatattattaaaatatatttaggtaatgacatgcct
gtaaagattgaatataccttagctggagttaatttaacattcctcttagctccaagaatt
gaaggataa

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