Methanocaldococcus fervens: Mefer_0549
Help
Entry
Mefer_0549 CDS
T00976
Name
(GenBank) protein of unknown function DUF87
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
mfe
Methanocaldococcus fervens
Brite
KEGG Orthology (KO) [BR:
mfe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfe03400
]
Mefer_0549
DNA repair and recombination proteins [BR:
mfe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
Mefer_0549
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF87
HAS-barrel
HerA_C
TrwB_AAD_bind
AAA_10
UFL1_C
jr-ZPR1
CbiA
Motif
Other DBs
NCBI-ProteinID:
ACV24370
UniProt:
C7P738
LinkDB
All DBs
Position
complement(520647..522188)
Genome browser
AA seq
513 aa
AA seq
DB search
MNNGVIGYTVGETRIDELTFLAKEAPKVGDYVKINYDNSELLGMVESTIQGNMALEDILN
IEHLEKIREFEDNSSYYILGKIKVLGDVGELEENGALKLPRVPPKPGIPIYKAEDELLKK
VFGSGHLKIGRLVTREDVEVKLDANKLCSRHLAILAMTGMGKSNTVAVLLRELNKLKATV
LVFDMHGEYRDIYCESEKLRVHVIEPKINIYRINNEDLCDLAGVDAQATKQRPYIRKAVK
EIQEKFKESDFSTVEDYINAIIEKLDEYKSDDNYKKDESSIQTAIFRLEDMLQFRKNIIT
LHYNPINDIKEHYINVIPMEELDENAVDIVVSYIIKAVLDDRKKIIINNGRRAAKPIFMI
FEEAHLIAPQNRKTRAKYYLSRIAREGRKFGVGLCLVSQRPKTLDAETLSQCSNLIISKL
IEPTDQKHVQMASENLSEDLIRQLTSLNIGEAIVLGPCIKVPAIVKVDRFDGRYGGEDLD
IVKIWEEDYMESENLKKSDNIEDNAFGEDDLFS
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgaataatggagttattggatatacagtaggagagacaaggattgatgaactaacattt
ttggcgaaggaagctccaaaagttggagattatgttaaaataaattatgataactccgaa
ttattgggaatggttgaaagcacaatccaaggaaacatggctttagaggatattttaaat
attgagcatttagaaaagattagagaatttgaagataattcctcctactacatactggga
aaaataaaggttttaggagatgttggggaattggaggaaaatggggctttaaagttgcca
agagttccgccaaaaccaggaattccaatttataaagctgaagatgaattgttaaaaaag
gtttttggtagtgggcatttaaagatagggcgtttggttacaagggaagatgtggaggtt
aaattagatgcaaacaagctatgctcaaggcatttggcaatattggcgatgaccgggatg
ggtaagtcaaatacagtggctgttttgcttagagagcttaataagcttaaagcaactgtt
ttggtctttgatatgcatggggagtatagagatatttactgtgaaagtgaaaagcttaga
gttcatgttattgagccaaaaataaacatttataggataaataacgaagatttatgtgat
ttggctggagtagatgcacaggcaacaaagcaaaggccatacataaggaaggcagttaag
gaaatccaagaaaagtttaaagaaagtgattttagtacagttgaagattatataaatgca
ataattgaaaaattggatgagtataagtcagatgacaactacaaaaaagatgagagtagt
attcaaacggctatatttagattggaggatatgctacagtttagaaaaaatatcataacc
ctccactacaatccaattaatgacattaaagagcattacataaatgtaatcccaatggaa
gagttggatgagaatgcagtagatatcgttgtttcatatataattaaagcagttttagat
gataggaagaagattattattaataatgggagaagagctgctaaaccaatatttatgatt
tttgaagaagctcatttaatagcccctcaaaatagaaaaacaagggctaaatattattta
agtaggatagcaagggagggaagaaagttcggagttggtctctgcctcgtctcacaaaga
cctaaaaccttagatgctgaaaccctctcccaatgctctaacttaataatatctaagctt
attgagcctacagaccaaaaacacgttcaaatggcatctgaaaatttaagtgaggattta
attaggcaattaacaagtttaaacattggagaggctatagttttggggccttgcataaag
gtgcctgcaattgttaaagtggatagatttgatggaagatatggaggagaagatttagat
attgttaaaatatgggaagaagattatatggaatctgaaaatctaaaaaaatcagataat
attgaagataatgcgtttggagaagatgatttattctcttaa
DBGET
integrated database retrieval system
