KEGG   Methanocaldococcus fervens: Mefer_0564
Entry
Mefer_0564        CDS       T00976                                 
Name
(GenBank) DEAD/H associated domain protein
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
mfe  Methanocaldococcus fervens
Brite
KEGG Orthology (KO) [BR:mfe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mfe03400]
    Mefer_0564
Enzymes [BR:mfe01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Mefer_0564
    5.6.2.6  RNA 3'-5' helicase
     Mefer_0564
DNA repair and recombination proteins [BR:mfe03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Mefer_0564
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD Helicase_C ResIII Cas3-like_C_2 SNF2-rel_dom AAA_19 PhoH Lipase_GDSL_3
Other DBs
NCBI-ProteinID: ACV24385
UniProt: C7P753
LinkDB
Position
534149..536674
AA seq 841 aa
MGRIEYLKKEYSDEEIYEILEEPVKEWFRRKYKTFTPPQRYAIKEIHERKNVLICSPTGS
GKTLSAFLAGINELIKLSMENKLEDRIYILYVSPLRALNNDIERNLKEPLKEIYEVAKEI
GVELDEIRVAVRTSDTTSSQKQKMLKKPPHILITTPESLAIALNSPKFSKFLEGIKYVIV
DEIHALTNKRGVHLSLSLERLNRIANFIRIGLSATISPLTEVAKFLVGNGRSCYIVDVSY
RKEIEIKVISPVDDFIYTSSEEISKKLYSLLKKLIEEHRTTLIFTNTRSATERVAFYLKQ
MGVEKIETHHSSLSREHRLEVEEKLKKGELKCVISSTSLELGVDIGSIDLVILLGSPKSV
SRALQRIGRSGHRLHEKSKGIIIPFDRDDLVENVVLAYDAKIGKIDRVYIPKNCLDVLAQ
HLVGMALEKVWDVDEAYNLVKKAYPYKDLSKEDFLDVLNYLAGGIKEKSVYAKIWLKDNK
FGRRGKSVRAIYYMNVGTIPDETSVAVIADGKYVGEVEEEFAEKLMKGDVFVLGGRTYKC
LGGKGNKIRVKEVFDEKPTIPAWFSEQLPLAYDLALDIEKFRKEALFSDIEDIEEKYDVD
EKTAKAIKNYMEEQDKFAIVPDDEKILIEHFEEEKRGYYIFHFVAGRRANEAIARAFANY
ISKMKKCNVRISVNDYGFALILPKNRKIKRVDIVELFNLDIVKNVKESIERSEILKRRFR
HVATRGFMILRRYMKRKISVDRQQFNAEMLLKYCKEVNHPLYRETIREILEDSLDIENAL
DYFEKVKKRKIYYLELPSPSPFAFNLVVSASSDVVFMEDKKKMIAELHKKVMEFISMKRN
K
NT seq 2526 nt   +upstreamnt  +downstreamnt
atgggaaggatagaatatttaaaaaaagagtattctgatgaagagatttatgaaattttg
gaagagccggttaaagaatggttcagaagaaagtataaaactttcacacctccgcagagg
tatgcaattaaagaaatccatgaaagaaagaatgttttaatttgctcaccaactggtagt
ggaaagacattatcagcttttttagcagggataaatgaattgataaagttatcaatggaa
aataagttagaagataggatttatatcttatatgtatccccattaagagctttaaacaat
gacattgaaaggaatttaaaagagccattaaaagaaatttatgaggttgctaaggagatt
ggtgtagagttggatgagattagagttgctgtaagaacaagtgacacgacaagctcacaa
aaacaaaaaatgctaaaaaaacctcctcatattttaataacaactccagaatctttggct
attgctttaaactctccgaaattttctaaatttttagaaggaattaaatatgtcatagtt
gatgaaatccacgctttaactaacaaaagaggggttcatctttccctttctttggagagg
ttgaatagaatagccaattttataagaattggtttatcagcaactatctctccattaacc
gaggttgccaaatttttagttggaaatggaaggagttgctatattgtagatgttagctat
agaaaagagattgagataaaggtcatctcaccagtagatgattttatctatacttcttca
gaagagattagtaaaaaactctacagtttgttaaaaaagcttatagaggagcatagaaca
accttaatatttacaaatacacgaagtgctactgagagagtagcgttttatttaaagcag
atgggagttgaaaaaatagaaacccatcattcttctttaagtagagaacataggttggaa
gttgaggagaaattgaaaaaaggagagcttaaatgtgttattagctcgacatcattggaa
ttaggtgtagatattggaagtatcgacttagttattctactcggctctccaaaaagtgtt
tcaagggctctacagaggataggtagaagtgggcataggttgcatgaaaaaagtaaagga
attataattccatttgatagagatgatttggtagaaaatgtggttttagcatatgatgca
aaaattgggaagattgacagggtttacattccaaaaaactgcctggatgttttagcccaa
catttggttggaatggctttagaaaaggtttgggacgttgatgaggcttacaacttagtt
aaaaaagcctatccatacaaagatttaagtaaagaggattttttagatgttttaaattat
ttagctggaggtattaaagaaaaaagcgtttatgcgaaaatttggcttaaagataacaaa
tttggaaggagagggaagagcgttagggcaatatactacatgaatgttggaactatccca
gatgaaacgtcagtagctgttattgcggatggtaaatatgttggagaggttgaggaagag
tttgctgaaaagttgatgaagggagatgtttttgttttagggggaagaacttacaaatgt
ttaggagggaaaggaaataaaattagagttaaagaggtttttgatgaaaaaccaactatt
ccagcatggttttctgagcagttgccgttagcttatgatttagctttagacattgaaaaa
tttaggaaagaagctttattttcagatattgaagatattgaagagaaatatgatgtggat
gaaaagacagctaaagcaattaaaaactatatggaagagcaggacaaatttgcaatagtt
ccagatgatgaaaagatattgatagagcattttgaagaagagaagaggggatattatata
ttccactttgtggctgggaggagggctaatgaggcaattgcaagggctttcgccaactat
atctcaaaaatgaagaaatgtaatgtaaggatatcagtaaatgattacggctttgcccta
atacttccaaaaaataggaagataaagagggtagatatagtagagctttttaatttggat
attgttaaaaatgtaaaggagagtatagaaaggagtgagattttaaagaggagatttagg
cacgtagctacaagaggatttatgattttgaggagatatatgaagagaaaaataagcgtt
gacagacaacagtttaatgctgaaatgctcttaaaatactgtaaagaggttaatcatcct
ctatatagagaaacaataagggaaattttggaggatagcttagatattgaaaatgcttta
gattattttgaaaaagttaaaaagaggaaaatttattatttagagttaccttctccttca
ccgtttgcatttaatttggttgtctcagcctcatcagatgttgtgtttatggaagataag
aagaagatgattgcagaacttcacaagaaggttatggaattcatctcaatgaaaagaaat
aaatag

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