Methanocaldococcus fervens: Mefer_0572
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Entry
Mefer_0572 CDS
T00976
Name
(GenBank) THUMP domain protein
KO
K07583
tRNA pseudouridine synthase 10 [EC:
5.4.99.25
]
Organism
mfe
Methanocaldococcus fervens
Brite
KEGG Orthology (KO) [BR:
mfe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mfe03016
]
Mefer_0572
Enzymes [BR:
mfe01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Mefer_0572
Transfer RNA biogenesis [BR:
mfe03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Mefer_0572
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pus10_C
Pus10_THUMP_arc
Rad50_zn_hook
CGI-121
PhoU
Motif
Other DBs
NCBI-ProteinID:
ACV24393
UniProt:
C7P761
LinkDB
All DBs
Position
complement(541762..543087)
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AA seq
441 aa
AA seq
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MEIINYEILKKYPLCDRCFGRLYAKLLHTTNTERGRALKLYKALELEARIKKAKEKEIDY
KDELELLKALAKSGVDEIRLEEANAEKESCPWCRGIFSKQKMEKLLNKAIELLKEYDFET
FLVGTHLPEEIKELEKEIETEFMESIKQEFGREFGKVLAVRLDKAPNKEYPDIVVHINPY
TEEIYLQVNPLFIKGRYRKLIRGIPQTRWPCRKCRGKGCELCNYTGKKYPISVEEIIAKP
FLEATKGKDAKFHGAGREDIDVRMLGDGRPFVLEIKEPKIRKIDLDKIAEEINKDGRVEV
LNLEFGVRKDKVIFKNTPHRKTYRALVECSEKITDDDLKLLEKELENRTIYQKTPRRVLH
RRADLERIRKVYKVKTNKVDDNHFEMIIYCDGGLYIKELISGDDGRTNPSVSSILNKNCI
CKELDVLKIHDDEGENYGSNE
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggagattataaattatgaaatattaaaaaaatatcctctttgtgatagatgctttgga
aggttgtatgctaagctattacatacaacaaacactgaaagaggtagagctttaaagcta
tataaagctttagaacttgaggcaagaataaaaaaagctaaagaaaaagaaattgattac
aaggatgagttggagctattaaaagctttggcaaaaagtggagtggatgagataaggttg
gaagaagcaaacgctgaaaaggagagttgcccttggtgtaggggtatttttagcaaacaa
aaaatggaaaaacttctaaataaagcaattgaacttttaaaggaatatgattttgagaca
tttttagtaggaactcatttaccagaagaaattaaagaacttgaaaaagagattgaaaca
gaatttatggagagtataaagcaggaatttggtagggaatttgggaaagtattagctgtt
agattagataaagctccaaataaagaatatcctgatattgttgttcatataaacccgtac
actgaagaaatttacctgcaagtaaatcctctatttattaaagggaggtataggaagtta
attaggggcattccacaaacgagatggccttgtaggaagtgtaggggaaaaggttgtgag
ctctgcaactacactggtaaaaaatatccaatatctgttgaagagattattgccaaacct
ttcttggaagctacaaaaggaaaagacgccaaattccatggagctggaagagaggatata
gatgttagaatgcttggagatgggagaccatttgttttagaaattaaagagccaaaaata
agaaaaatagatttggataaaattgctgaagagattaataaagatggtagggtggaggtt
ttaaacttagagtttggtgttaggaaagataaagttatatttaaaaacacaccacataga
aagacctatagagctttggttgaatgttcagagaaaattactgacgatgatttaaaactt
cttgaaaaagagcttgaaaatagaactatctatcaaaaaacaccaagaagagttttgcat
agaagagctgatttagagagaatccgtaaggtatataaagttaaaaccaataaagtagat
gacaatcattttgagatgattatatactgtgatggtggattatatataaaagagctaatc
agcggagatgatgggagaacaaacccatccgtctcatccatattaaacaaaaactgtata
tgtaaggaattggatgttttaaaaatacatgacgacgaaggtgagaattatggttcaaat
gagtga
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